Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CEP67_RS02195 | Genome accession | NZ_CP022096 |
| Coordinates | 476679..477653 (-) | Length | 324 a.a. |
| NCBI ID | WP_002472484.1 | Uniprot ID | - |
| Organism | Staphylococcus pettenkoferi strain FDAARGOS_288 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 471679..482653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP67_RS02160 (CEP67_02160) | gcvT | 472240..473331 (-) | 1092 | WP_002472490.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CEP67_RS02165 (CEP67_02165) | - | 473510..473983 (-) | 474 | WP_081479410.1 | shikimate kinase | - |
| CEP67_RS02170 (CEP67_02170) | - | 474190..474579 (-) | 390 | WP_002472492.1 | ComGF family competence protein | - |
| CEP67_RS11990 (CEP67_02175) | - | 474605..474892 (-) | 288 | WP_088606290.1 | hypothetical protein | - |
| CEP67_RS02180 (CEP67_02180) | comGD | 474879..475331 (-) | 453 | WP_049405251.1 | competence type IV pilus minor pilin ComGD | - |
| CEP67_RS02185 (CEP67_02185) | comGC | 475309..475626 (-) | 318 | WP_002472491.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CEP67_RS02190 (CEP67_02190) | comGB | 475640..476707 (-) | 1068 | WP_002472482.1 | competence type IV pilus assembly protein ComGB | - |
| CEP67_RS02195 (CEP67_02195) | comGA | 476679..477653 (-) | 975 | WP_002472484.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CEP67_RS02200 (CEP67_02200) | - | 477720..478346 (-) | 627 | WP_088606291.1 | MBL fold metallo-hydrolase | - |
| CEP67_RS02205 (CEP67_02205) | - | 478346..478672 (-) | 327 | WP_002472477.1 | MTH1187 family thiamine-binding protein | - |
| CEP67_RS02210 (CEP67_02210) | - | 478672..479658 (-) | 987 | WP_002472496.1 | ROK family glucokinase | - |
| CEP67_RS02215 (CEP67_02215) | - | 479663..479857 (-) | 195 | WP_002472468.1 | YqgQ family protein | - |
| CEP67_RS02220 (CEP67_02220) | - | 479859..481298 (-) | 1440 | WP_088606292.1 | rhomboid family intramembrane serine protease | - |
| CEP67_RS02225 (CEP67_02225) | - | 481311..481847 (-) | 537 | WP_088606293.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| CEP67_RS02230 (CEP67_02230) | rpmG | 482310..482459 (-) | 150 | WP_002472489.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37266.24 Da Isoelectric Point: 6.6567
>NTDB_id=236640 CEP67_RS02195 WP_002472484.1 476679..477653(-) (comGA) [Staphylococcus pettenkoferi strain FDAARGOS_288]
MKLLFKEMISRAIKHEASDIHFIPSEEEVFVKFRINDNLQSFESIQHETYTKLLTYMKYLAGLDVSTHIIAQSGRYLFKA
KRPYYLRISTLPLSLGIESCVIRLIPQYFEQHSETKHGDILYKLMNKKQGLILFSGPTGSGKSTLMYQMINYAKDQLNLN
IITVEDPIEQKINGITQISINEKAGINYASSFKAILRCDPDIILIGEIRDANVAKYVIHASMSGHLVLSTIHANDCRGTL
LRLLEMGISEQEIKQALINITNQRLIPISDDKRELACEMMMKEDIAYFFEHEQTMPYTFQNLSYILKEMSKEGVICEDTV
DRYL
MKLLFKEMISRAIKHEASDIHFIPSEEEVFVKFRINDNLQSFESIQHETYTKLLTYMKYLAGLDVSTHIIAQSGRYLFKA
KRPYYLRISTLPLSLGIESCVIRLIPQYFEQHSETKHGDILYKLMNKKQGLILFSGPTGSGKSTLMYQMINYAKDQLNLN
IITVEDPIEQKINGITQISINEKAGINYASSFKAILRCDPDIILIGEIRDANVAKYVIHASMSGHLVLSTIHANDCRGTL
LRLLEMGISEQEIKQALINITNQRLIPISDDKRELACEMMMKEDIAYFFEHEQTMPYTFQNLSYILKEMSKEGVICEDTV
DRYL
Nucleotide
Download Length: 975 bp
>NTDB_id=236640 CEP67_RS02195 WP_002472484.1 476679..477653(-) (comGA) [Staphylococcus pettenkoferi strain FDAARGOS_288]
TTGAAACTATTATTCAAAGAAATGATTTCAAGGGCAATTAAGCACGAAGCGTCGGATATTCACTTTATTCCATCAGAAGA
GGAAGTATTTGTGAAGTTTCGTATCAATGATAACCTGCAGAGTTTTGAATCAATTCAACACGAAACTTATACGAAATTAC
TGACGTATATGAAGTATTTGGCAGGTCTCGATGTGTCGACCCATATCATCGCACAAAGCGGTCGCTATTTATTCAAAGCT
AAGCGACCTTATTATTTACGTATTTCAACATTGCCGCTGTCCTTAGGAATTGAAAGTTGTGTTATTCGTTTAATACCACA
ATACTTTGAACAGCATTCTGAAACGAAACACGGAGATATTTTGTACAAGCTAATGAATAAGAAACAAGGCTTGATTCTCT
TTAGTGGTCCAACAGGATCAGGTAAAAGCACTTTAATGTATCAGATGATTAATTACGCTAAAGATCAATTAAATTTGAAT
ATCATCACCGTGGAAGATCCGATCGAACAAAAAATAAATGGCATCACTCAAATCTCGATTAACGAAAAGGCAGGGATTAA
CTATGCGAGTTCCTTTAAAGCGATACTACGTTGTGATCCAGATATCATACTTATCGGTGAAATTCGTGATGCTAATGTAG
CAAAATATGTAATTCATGCAAGTATGAGTGGGCACCTCGTCCTTTCTACAATTCACGCGAATGATTGTAGAGGTACTTTA
CTTCGTCTGTTGGAAATGGGGATATCTGAGCAAGAAATTAAGCAAGCGTTGATTAATATTACGAATCAACGGCTCATTCC
TATTAGCGATGATAAGCGAGAATTGGCCTGTGAAATGATGATGAAAGAGGATATCGCTTACTTTTTCGAGCACGAGCAAA
CGATGCCTTATACTTTCCAGAATTTATCTTATATTCTTAAAGAAATGTCGAAAGAGGGTGTTATTTGTGAAGACACCGTC
GATCGATATCTCTAA
TTGAAACTATTATTCAAAGAAATGATTTCAAGGGCAATTAAGCACGAAGCGTCGGATATTCACTTTATTCCATCAGAAGA
GGAAGTATTTGTGAAGTTTCGTATCAATGATAACCTGCAGAGTTTTGAATCAATTCAACACGAAACTTATACGAAATTAC
TGACGTATATGAAGTATTTGGCAGGTCTCGATGTGTCGACCCATATCATCGCACAAAGCGGTCGCTATTTATTCAAAGCT
AAGCGACCTTATTATTTACGTATTTCAACATTGCCGCTGTCCTTAGGAATTGAAAGTTGTGTTATTCGTTTAATACCACA
ATACTTTGAACAGCATTCTGAAACGAAACACGGAGATATTTTGTACAAGCTAATGAATAAGAAACAAGGCTTGATTCTCT
TTAGTGGTCCAACAGGATCAGGTAAAAGCACTTTAATGTATCAGATGATTAATTACGCTAAAGATCAATTAAATTTGAAT
ATCATCACCGTGGAAGATCCGATCGAACAAAAAATAAATGGCATCACTCAAATCTCGATTAACGAAAAGGCAGGGATTAA
CTATGCGAGTTCCTTTAAAGCGATACTACGTTGTGATCCAGATATCATACTTATCGGTGAAATTCGTGATGCTAATGTAG
CAAAATATGTAATTCATGCAAGTATGAGTGGGCACCTCGTCCTTTCTACAATTCACGCGAATGATTGTAGAGGTACTTTA
CTTCGTCTGTTGGAAATGGGGATATCTGAGCAAGAAATTAAGCAAGCGTTGATTAATATTACGAATCAACGGCTCATTCC
TATTAGCGATGATAAGCGAGAATTGGCCTGTGAAATGATGATGAAAGAGGATATCGCTTACTTTTTCGAGCACGAGCAAA
CGATGCCTTATACTTTCCAGAATTTATCTTATATTCTTAAAGAAATGTCGAAAGAGGGTGTTATTTGTGAAGACACCGTC
GATCGATATCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.802 |
100 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.802 |
100 |
0.608 |
| pilB | Haemophilus influenzae Rd KW20 |
34.615 |
100 |
0.361 |