Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | A6J94_RS02370 | Genome accession | NZ_CP022080 |
| Coordinates | 482786..483088 (-) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain FDAARGOS_266 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 477786..488088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J94_RS02335 (A6J94_02335) | - | 478199..478960 (+) | 762 | WP_002856328.1 | ATP-binding protein | - |
| A6J94_RS02340 (A6J94_02340) | - | 478957..479643 (+) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| A6J94_RS02345 (A6J94_02345) | thiD | 479640..480452 (+) | 813 | WP_012006730.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| A6J94_RS02350 (A6J94_02350) | thiE | 480442..481074 (+) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| A6J94_RS02355 (A6J94_02355) | hemD | 481052..481681 (+) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| A6J94_RS02360 (A6J94_02360) | - | 481678..482130 (-) | 453 | WP_002869049.1 | hypothetical protein | - |
| A6J94_RS02365 (A6J94_02365) | - | 482127..482789 (-) | 663 | WP_012006728.1 | hypothetical protein | - |
| A6J94_RS02370 (A6J94_02370) | ctsT | 482786..483088 (-) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| A6J94_RS02375 (A6J94_02375) | proC | 483085..483816 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| A6J94_RS02380 (A6J94_02380) | fliW | 483816..484205 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| A6J94_RS02385 (A6J94_02385) | - | 484366..485013 (+) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| A6J94_RS02390 (A6J94_02390) | lon | 485030..487405 (+) | 2376 | WP_012006726.1 | endopeptidase La | - |
| A6J94_RS02395 (A6J94_02395) | rpsR | 487466..487726 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=236518 A6J94_RS02370 WP_002877750.1 482786..483088(-) (ctsT) [Campylobacter jejuni strain FDAARGOS_266]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=236518 A6J94_RS02370 WP_002877750.1 482786..483088(-) (ctsT) [Campylobacter jejuni strain FDAARGOS_266]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |