Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CEQ14_RS06785 | Genome accession | NZ_CP022056 |
| Coordinates | 1370069..1370488 (+) | Length | 139 a.a. |
| NCBI ID | WP_011302684.1 | Uniprot ID | - |
| Organism | Staphylococcus saprophyticus strain FDAARGOS_336 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1365069..1375488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ14_RS06755 (CEQ14_06780) | atpD | 1365185..1366597 (+) | 1413 | WP_002482726.1 | F0F1 ATP synthase subunit beta | - |
| CEQ14_RS06760 (CEQ14_06785) | - | 1366617..1367021 (+) | 405 | WP_002482727.1 | F0F1 ATP synthase subunit epsilon | - |
| CEQ14_RS06765 (CEQ14_06790) | - | 1367283..1367516 (+) | 234 | WP_011302682.1 | DUF1146 family protein | - |
| CEQ14_RS06770 (CEQ14_06795) | murA | 1367623..1368888 (+) | 1266 | WP_011302683.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CEQ14_RS06775 (CEQ14_06800) | fabZ | 1368943..1369380 (+) | 438 | WP_002482729.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CEQ14_RS06780 (CEQ14_06805) | - | 1369438..1369878 (-) | 441 | WP_002482730.1 | YwpF-like family protein | - |
| CEQ14_RS06785 (CEQ14_06810) | ssb | 1370069..1370488 (+) | 420 | WP_011302684.1 | single-stranded DNA-binding protein | Machinery gene |
| CEQ14_RS06790 (CEQ14_06815) | - | 1370914..1371630 (+) | 717 | WP_105577658.1 | transglycosylase family protein | - |
| CEQ14_RS06795 (CEQ14_06820) | tenA | 1371937..1372626 (+) | 690 | WP_011302686.1 | thiaminase II | - |
| CEQ14_RS06800 (CEQ14_06825) | thiD | 1372619..1373440 (+) | 822 | WP_011302687.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CEQ14_RS06805 (CEQ14_06830) | thiM | 1373433..1374224 (+) | 792 | WP_011302688.1 | hydroxyethylthiazole kinase | - |
| CEQ14_RS06810 (CEQ14_06835) | thiE | 1374224..1374862 (+) | 639 | WP_011302689.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16059.43 Da Isoelectric Point: 7.7651
>NTDB_id=236253 CEQ14_RS06785 WP_011302684.1 1370069..1370488(+) (ssb) [Staphylococcus saprophyticus strain FDAARGOS_336]
MINNIVIVGRLTKDPKIYDKEEKKLATFCVAVSRNYKDKNQTPVCDYLFCKAFGKMATNIEKYTKQGSLVGITGQMQSHK
YEKEGQTHFVSEILIESIKFMSPQNKDKNDLLFEPFPLEHSQNAFKDINVQNNDIYEIV
MINNIVIVGRLTKDPKIYDKEEKKLATFCVAVSRNYKDKNQTPVCDYLFCKAFGKMATNIEKYTKQGSLVGITGQMQSHK
YEKEGQTHFVSEILIESIKFMSPQNKDKNDLLFEPFPLEHSQNAFKDINVQNNDIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=236253 CEQ14_RS06785 WP_011302684.1 1370069..1370488(+) (ssb) [Staphylococcus saprophyticus strain FDAARGOS_336]
ATGATTAATAACATTGTTATCGTAGGGCGACTAACTAAGGACCCTAAAATATATGATAAGGAGGAGAAAAAATTAGCTAC
ATTTTGTGTAGCTGTATCAAGGAACTATAAAGATAAGAATCAAACCCCGGTATGTGATTATTTATTTTGTAAAGCATTTG
GAAAAATGGCAACAAACATTGAGAAATATACGAAGCAAGGCTCACTTGTAGGTATAACAGGCCAAATGCAATCACATAAA
TATGAAAAAGAAGGTCAGACGCATTTTGTATCAGAAATACTTATTGAATCAATTAAATTCATGTCTCCACAAAACAAAGA
TAAAAATGATTTACTTTTTGAACCATTCCCGCTAGAGCATTCCCAAAATGCATTTAAAGACATTAACGTACAAAATAATG
ATATATATGAAATTGTATAA
ATGATTAATAACATTGTTATCGTAGGGCGACTAACTAAGGACCCTAAAATATATGATAAGGAGGAGAAAAAATTAGCTAC
ATTTTGTGTAGCTGTATCAAGGAACTATAAAGATAAGAATCAAACCCCGGTATGTGATTATTTATTTTGTAAAGCATTTG
GAAAAATGGCAACAAACATTGAGAAATATACGAAGCAAGGCTCACTTGTAGGTATAACAGGCCAAATGCAATCACATAAA
TATGAAAAAGAAGGTCAGACGCATTTTGTATCAGAAATACTTATTGAATCAATTAAATTCATGTCTCCACAAAACAAAGA
TAAAAATGATTTACTTTTTGAACCATTCCCGCTAGAGCATTCCCAAAATGCATTTAAAGACATTAACGTACAAAATAATG
ATATATATGAAATTGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
60.87 |
99.281 |
0.604 |
| ssb | Staphylococcus aureus MW2 |
60.145 |
99.281 |
0.597 |