Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CEQ03_RS20270 Genome accession   NZ_CP022053
Coordinates   4312336..4312737 (+) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain FDAARGOS_325     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4307336..4317737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEQ03_RS20255 (CEQ03_20115) tsaB 4308975..4309688 (+) 714 WP_049460211.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  CEQ03_RS20260 (CEQ03_20120) - 4310264..4311148 (-) 885 WP_049459282.1 energy transducer TonB -
  CEQ03_RS20265 (CEQ03_20125) gshB 4311148..4312095 (-) 948 WP_049395795.1 glutathione synthase -
  CEQ03_RS20270 (CEQ03_20130) pilG 4312336..4312737 (+) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  CEQ03_RS20275 (CEQ03_20135) - 4312756..4313118 (+) 363 WP_005410717.1 response regulator -
  CEQ03_RS20280 (CEQ03_20140) - 4313118..4313648 (+) 531 WP_005410716.1 chemotaxis protein CheW -
  CEQ03_RS20285 (CEQ03_20145) - 4313690..4315726 (+) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=236242 CEQ03_RS20270 WP_005418455.1 4312336..4312737(+) (pilG) [Stenotrophomonas maltophilia strain FDAARGOS_325]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=236242 CEQ03_RS20270 WP_005418455.1 4312336..4312737(+) (pilG) [Stenotrophomonas maltophilia strain FDAARGOS_325]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment