Detailed information NTG0023610

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: BJE04_RS14200
• Genome accession: NC_005139
• Coordinates: 3021728..3024550 (+)
• Length: 940 a.a.
• NCBI ID: WP_043877332.1
• Uniprot ID: Q7MHB5
• Organism: Vibrio vulnificus YJ016
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3016728..3029550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJE04_RS14180 (VV2952)	csrD	3016892..3018889 (-)	1998	WP_043877331.1	RNase E specificity factor CsrD	-
BJE04_RS14185 (VV2953)	ssb	3019042..3019581 (-)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
BJE04_RS14190 (VV2954)	qstR	3019881..3020528 (+)	648	WP_011079388.1	response regulator transcription factor	Regulator
BJE04_RS14195 (VV2955)	galU	3020714..3021586 (+)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
BJE04_RS14200 (VV2956)	uvrA	3021728..3024550 (+)	2823	WP_043877332.1	excinuclease ABC subunit UvrA	Machinery gene
BJE04_RS14205 (VV2957)	-	3024617..3026380 (+)	1764	WP_011151255.1	PglL family O-oligosaccharyltransferase	-
BJE04_RS14210 (VV2958)	-	3026445..3027566 (-)	1122	WP_011151256.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
BJE04_RS14215 (VV2959)	lysC	3028081..3029430 (+)	1350	WP_011151257.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103994.49 Da
• Isoelectric Point: 6.5391

>NTDB_id=23610 BJE04_RS14200 WP_043877332.1 3021728..3024550(+) (uvrA) [Vibrio vulnificus YJ016]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPDHKVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRGDLQQRLAESFETALELSGGIAVIAPMEGD
GEEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPERVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHAPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCTSCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKEVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=23610 BJE04_RS14200 WP_043877332.1 3021728..3024550(+) (uvrA) [Vibrio vulnificus YJ016]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAACATAAATCTCACCATTCCCCGAGATAAACTGAT
CGTTATTACGGGCTTATCCGGCTCAGGTAAGTCTTCTTTGGCATTTGACACTTTGTACGCAGAGGGTCAGCGACGTTATG
TGGAATCCCTCTCTGCTTATGCTCGTCAATTTCTTTCATTGATGGAAAAGCCCGACGTTGACCACATTGAAGGCCTCTCG
CCAGCAATTTCTATCGAGCAAAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACGGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGACCACAAAGTCCCTTTAGCGGCTCAAACCATTAGCC
AAATGGTCGACAAAGTGCTTGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTGAAAGAGCGCAAAGGC
GAGCACGTTAAAACATTAGAGAATCTTGCTGCTCAAGGTTTTATTCGTGCGCGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTGGCGATTTAC
AACAAAGGCTCGCAGAATCCTTTGAAACGGCACTGGAACTCTCAGGTGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGATCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCAGGGGCTTGTGGCACCTGTGATGGCCTCGGGGTACAGCAATATTTTGACCCAGAACGTGTGA
TTCAAGATGCCAATTTAAGTCTTGCACAAGGGGCGATTCGTGGTTGGGATCAGAAGAACTATTACTATTTCCAAATGCTC
ACCTCGCTGGCTGAGCATTACGATTTCGATTTACATGCCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAGGTCATATT
AAAAGGCTCAGGGCGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTTAAACGCCATCCATTTG
AAGGTATTCTCAATACACTCGAGCGCCGTTATCGCGACACCGAATCTAACTCGGTACGAGAAGAGTTGGTGAAATATATC
TCCACCAAACCTTGCACCAGTTGTGGCGGAACGCGTCTGCGCCTAGAAGCACGCAACGTGTTTATTAATGACACGACATT
GCCACAAATCGTCGAGTTGAGTATCGCGGATGCATTGACCTTTTTCGCCACCTTAAAACTCGAAGGGCAGCGAGCTCAAA
TTGCGGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAACGTTGGCCTCAATTATTTGAACCTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTGGCTAGCCAGATCGGTGCCGGTTTGGTTGGCGT
GATGTACGTGCTCGATGAACCGTCAATCGGCCTTCACCAGCGTGACAACGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGATATTGGC
CCTGGTGCAGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTGAGCGGTGCCAAGCAGATTATTGTGCCGACTCAACGCACACCAAGAGATAAGAACAAAACCGTTGAGC
TCATTGGAGCCAGTGGCAACAACCTTAAAGAGGTCAATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCGGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCTCATACCCAACTCAATGGGGCGACCACAGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGTC
GCACACCGCGTTCAAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGTTGTTCTCCGGCACTCAAGAGTCT
CGTTCACGTGGCTACAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTAGAGATGACCGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGCAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGATTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

3D structure

• AlphaFold DB: Q7MHB5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582