Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | C6Y56_RS15125 | Genome accession | NZ_CP027561 |
| Coordinates | 3388678..3389319 (-) | Length | 213 a.a. |
| NCBI ID | WP_024012761.1 | Uniprot ID | A0AAU7F4B5 |
| Organism | Pseudomonas fluorescens strain G7 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3383678..3394319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6Y56_RS15095 (C6Y56_15310) | - | 3384207..3385559 (+) | 1353 | WP_169430572.1 | cytochrome c | - |
| C6Y56_RS15115 (C6Y56_15330) | pgsA | 3386259..3386819 (-) | 561 | WP_169430573.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| C6Y56_RS15120 (C6Y56_15335) | uvrC | 3386852..3388675 (-) | 1824 | WP_169430574.1 | excinuclease ABC subunit UvrC | - |
| C6Y56_RS15125 (C6Y56_15340) | letA | 3388678..3389319 (-) | 642 | WP_024012761.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| C6Y56_RS15130 (C6Y56_15345) | - | 3389447..3389911 (-) | 465 | WP_169430575.1 | GNAT family N-acetyltransferase | - |
| C6Y56_RS29400 | - | 3390100..3390228 (+) | 129 | WP_279382168.1 | hypothetical protein | - |
| C6Y56_RS15135 (C6Y56_15350) | - | 3390564..3391640 (+) | 1077 | WP_169430576.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| C6Y56_RS15140 (C6Y56_15355) | - | 3391688..3392797 (-) | 1110 | WP_249314291.1 | hypothetical protein | - |
| C6Y56_RS15145 (C6Y56_15360) | - | 3393134..3394003 (+) | 870 | WP_169430577.1 | triacylglycerol lipase | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23326.24 Da Isoelectric Point: 6.2490
>NTDB_id=235819 C6Y56_RS15125 WP_024012761.1 3388678..3389319(-) (letA) [Pseudomonas fluorescens strain G7]
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVA
VTVCEEDPFPTRLLQAGAAGYLTKGAGLPEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTNDSPFDALSEREIQIALMI
VGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELTLLAVRHGMVDASA
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVA
VTVCEEDPFPTRLLQAGAAGYLTKGAGLPEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTNDSPFDALSEREIQIALMI
VGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELTLLAVRHGMVDASA
Nucleotide
Download Length: 642 bp
>NTDB_id=235819 C6Y56_RS15125 WP_024012761.1 3388678..3389319(-) (letA) [Pseudomonas fluorescens strain G7]
TTGATTAGGGTGCTAGTGGTCGATGACCATGATCTCGTTCGTACAGGCATTACACGTATGCTGGCCGATATCGATGGCCT
GCAAGTGGTTGGTCAGGCCGAGTCCGGGGAAGAATCCCTTATCAAGGCCCGTGAGTTGAAACCCGATGTGGTGCTGATGG
ACGTCAAGATGCCTGGCATCGGCGGCCTGGAAGCCACGCGCAAATTGCTGCGCAGCCATCCGGACATCAAGGTGGTTGCG
GTCACCGTGTGCGAGGAAGATCCTTTTCCTACGCGCTTGTTGCAGGCCGGGGCTGCGGGTTACCTGACCAAGGGCGCCGG
ACTGCCGGAAATGGTGCAAGCCATTCGCCTGGTGTTCGCCGGTCAGCGTTACATCAGCCCGCAGATTGCCCAGCAACTGG
CGATCAAGTCCTTTCAGCCAACCAATGATTCTCCGTTCGACGCCTTGTCGGAGCGGGAAATCCAGATTGCCCTGATGATT
GTCGGCTGTCAGAAGGTACAGATCATTTCCGACAAATTGTGCCTGTCGCCTAAGACCGTCAACACTTACCGTTATCGTAT
TTTCGAGAAGCTTTCGATCAGTAGCGATGTCGAGCTGACGCTGCTTGCGGTACGCCATGGCATGGTCGATGCCAGCGCCT
GA
TTGATTAGGGTGCTAGTGGTCGATGACCATGATCTCGTTCGTACAGGCATTACACGTATGCTGGCCGATATCGATGGCCT
GCAAGTGGTTGGTCAGGCCGAGTCCGGGGAAGAATCCCTTATCAAGGCCCGTGAGTTGAAACCCGATGTGGTGCTGATGG
ACGTCAAGATGCCTGGCATCGGCGGCCTGGAAGCCACGCGCAAATTGCTGCGCAGCCATCCGGACATCAAGGTGGTTGCG
GTCACCGTGTGCGAGGAAGATCCTTTTCCTACGCGCTTGTTGCAGGCCGGGGCTGCGGGTTACCTGACCAAGGGCGCCGG
ACTGCCGGAAATGGTGCAAGCCATTCGCCTGGTGTTCGCCGGTCAGCGTTACATCAGCCCGCAGATTGCCCAGCAACTGG
CGATCAAGTCCTTTCAGCCAACCAATGATTCTCCGTTCGACGCCTTGTCGGAGCGGGAAATCCAGATTGCCCTGATGATT
GTCGGCTGTCAGAAGGTACAGATCATTTCCGACAAATTGTGCCTGTCGCCTAAGACCGTCAACACTTACCGTTATCGTAT
TTTCGAGAAGCTTTCGATCAGTAGCGATGTCGAGCTGACGCTGCTTGCGGTACGCCATGGCATGGTCGATGCCAGCGCCT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
56.667 |
98.592 |
0.559 |
| letA | Legionella pneumophila strain ERS1305867 |
56.667 |
98.592 |
0.559 |