Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CD799_RS07955 | Genome accession | NZ_CP022002 |
| Coordinates | 1689191..1689748 (-) | Length | 185 a.a. |
| NCBI ID | WP_003125211.1 | Uniprot ID | A0A6A9K9C7 |
| Organism | Pseudomonas aeruginosa strain Pa1242 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1684191..1694748
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD799_RS07940 (CD799_07940) | pilY1 | 1684289..1687774 (-) | 3486 | WP_088376618.1 | type 4a pilus biogenesis protein PilY1 | - |
| CD799_RS07945 (CD799_07945) | pilX | 1687786..1688373 (-) | 588 | WP_033972921.1 | type 4a pilus minor pilin PilX | - |
| CD799_RS07950 (CD799_07950) | pilW | 1688370..1689194 (-) | 825 | WP_033976380.1 | type 4a pilus minor pilin PilW | - |
| CD799_RS07955 (CD799_07955) | pilV | 1689191..1689748 (-) | 558 | WP_003125211.1 | type 4a pilus minor pilin PilV | Machinery gene |
| CD799_RS07960 (CD799_07960) | - | 1689739..1690245 (-) | 507 | WP_003134935.1 | GspH/FimT family pseudopilin | - |
| CD799_RS07965 (CD799_07965) | - | 1690351..1690860 (-) | 510 | WP_033976381.1 | GspH/FimT family pseudopilin | - |
| CD799_RS07970 (CD799_07970) | thiO | 1690995..1692089 (+) | 1095 | WP_088376838.1 | glycine oxidase ThiO | - |
| CD799_RS07975 (CD799_07975) | pilR | 1692135..1693472 (-) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20087.19 Da Isoelectric Point: 8.2171
>NTDB_id=235763 CD799_RS07955 WP_003125211.1 1689191..1689748(-) (pilV) [Pseudomonas aeruginosa strain Pa1242]
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=235763 CD799_RS07955 WP_003125211.1 1689191..1689748(-) (pilV) [Pseudomonas aeruginosa strain Pa1242]
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGTGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGTGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |