Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CEF05_RS06380 Genome accession   NZ_CP021997
Coordinates   1304624..1305901 (+) Length   425 a.a.
NCBI ID   WP_053267829.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain LPL-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1299624..1310901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEF05_RS06355 (CEF05_06360) tsf 1300521..1301399 (+) 879 WP_003644498.1 translation elongation factor Ts -
  CEF05_RS06360 (CEF05_06365) pyrH 1301599..1302321 (+) 723 WP_003640737.1 UMP kinase -
  CEF05_RS06365 (CEF05_06370) frr 1302323..1302886 (+) 564 WP_053267828.1 ribosome recycling factor -
  CEF05_RS06370 (CEF05_06375) - 1303006..1303785 (+) 780 WP_003640735.1 isoprenyl transferase -
  CEF05_RS06375 (CEF05_06380) - 1303801..1304586 (+) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  CEF05_RS06380 (CEF05_06385) eeP 1304624..1305901 (+) 1278 WP_053267829.1 RIP metalloprotease RseP Regulator
  CEF05_RS06385 (CEF05_06390) - 1305941..1307650 (+) 1710 WP_053267830.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45807.32 Da        Isoelectric Point: 9.5616

>NTDB_id=235636 CEF05_RS06380 WP_053267829.1 1304624..1305901(+) (eeP) [Lactiplantibacillus plantarum strain LPL-1]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRLLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=235636 CEF05_RS06380 WP_053267829.1 1304624..1305901(+) (eeP) [Lactiplantibacillus plantarum strain LPL-1]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGCTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGTCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAACGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATCTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.832

100

0.492
  eeP Streptococcus thermophilus LMD-9

48.832

100

0.492

Multiple sequence alignment