Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   TRNA_RS27570 Genome accession   NC_006270
Coordinates   1230248..1230433 (+) Length   61 a.a.
NCBI ID   WP_011197761.1    Uniprot ID   A0A6I7TNH1
Organism   Bacillus licheniformis DSM 13 = ATCC 14580     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1225248..1235433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TRNA_RS27540 (BL03255) - 1226133..1226945 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  TRNA_RS27545 (BL05108) - 1227127..1227306 (+) 180 WP_003180573.1 YjzC family protein -
  TRNA_RS27550 (BL03256) - 1227377..1227571 (-) 195 WP_009328851.1 YjzD family protein -
  TRNA_RS27555 (BL03248) - 1227803..1228537 (+) 735 WP_011197758.1 hypothetical protein -
  TRNA_RS27560 (BL03249) - 1228624..1229199 (+) 576 WP_011197759.1 hypothetical protein -
  TRNA_RS27565 (BL03251) med 1229284..1230237 (+) 954 WP_011197760.1 BMP family ABC transporter substrate-binding protein Regulator
  TRNA_RS27570 (BL03252) comZ 1230248..1230433 (+) 186 WP_011197761.1 ComZ family protein Regulator
  TRNA_RS27575 (BL03257) - 1230486..1230728 (-) 243 WP_011197762.1 hypothetical protein -
  TRNA_RS27580 (BL03313) - 1230898..1231836 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  TRNA_RS27585 (BL03314) fabF 1231858..1233096 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  TRNA_RS27590 (BL03315) - 1233184..1233972 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  TRNA_RS27595 (BL03316) - 1234164..1235138 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6842.96 Da        Isoelectric Point: 4.2564

>NTDB_id=23557 TRNA_RS27570 WP_011197761.1 1230248..1230433(+) (comZ) [Bacillus licheniformis DSM 13 = ATCC 14580]
MHEKSMEFLQIAMKYVPEAKAEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKAEAGSDA

Nucleotide


Download         Length: 186 bp        

>NTDB_id=23557 TRNA_RS27570 WP_011197761.1 1230248..1230433(+) (comZ) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAGTACGTTCCGGAAGCGAAAGCAGAGATGGAGAAAGCGGG
AATCGAACTTTCCCCGGAAATGCTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCCGAGGCTTACGAGCTCGGTA
AAGCGGAAGCCGGTTCAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TNH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.333

98.361

0.721

Multiple sequence alignment