Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | TRNA_RS27565 | Genome accession | NC_006270 |
| Coordinates | 1229284..1230237 (+) | Length | 317 a.a. |
| NCBI ID | WP_011197760.1 | Uniprot ID | Q65LD8 |
| Organism | Bacillus licheniformis DSM 13 = ATCC 14580 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1224284..1235237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TRNA_RS27535 (BL03247) | argF | 1225149..1226099 (+) | 951 | WP_009328852.1 | ornithine carbamoyltransferase | - |
| TRNA_RS27540 (BL03255) | - | 1226133..1226945 (-) | 813 | WP_003180571.1 | undecaprenyl-diphosphate phosphatase | - |
| TRNA_RS27545 (BL05108) | - | 1227127..1227306 (+) | 180 | WP_003180573.1 | YjzC family protein | - |
| TRNA_RS27550 (BL03256) | - | 1227377..1227571 (-) | 195 | WP_009328851.1 | YjzD family protein | - |
| TRNA_RS27555 (BL03248) | - | 1227803..1228537 (+) | 735 | WP_011197758.1 | hypothetical protein | - |
| TRNA_RS27560 (BL03249) | - | 1228624..1229199 (+) | 576 | WP_011197759.1 | hypothetical protein | - |
| TRNA_RS27565 (BL03251) | med | 1229284..1230237 (+) | 954 | WP_011197760.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| TRNA_RS27570 (BL03252) | comZ | 1230248..1230433 (+) | 186 | WP_011197761.1 | ComZ family protein | Regulator |
| TRNA_RS27575 (BL03257) | - | 1230486..1230728 (-) | 243 | WP_011197762.1 | hypothetical protein | - |
| TRNA_RS27580 (BL03313) | - | 1230898..1231836 (+) | 939 | WP_011197763.1 | beta-ketoacyl-ACP synthase III | - |
| TRNA_RS27585 (BL03314) | fabF | 1231858..1233096 (+) | 1239 | WP_009328845.1 | beta-ketoacyl-ACP synthase II | - |
| TRNA_RS27590 (BL03315) | - | 1233184..1233972 (+) | 789 | WP_009328844.1 | DUF2268 domain-containing protein | - |
| TRNA_RS27595 (BL03316) | - | 1234164..1235138 (+) | 975 | WP_009328843.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35421.10 Da Isoelectric Point: 4.7166
>NTDB_id=23556 TRNA_RS27565 WP_011197760.1 1229284..1230237(+) (med) [Bacillus licheniformis DSM 13 = ATCC 14580]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH
Nucleotide
Download Length: 954 bp
>NTDB_id=23556 TRNA_RS27565 WP_011197760.1 1229284..1230237(+) (med) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGACCACCAAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGACCACCAAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
68.153 |
99.054 |
0.675 |