Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | CEA93_RS02895 | Genome accession | NZ_CP021980 |
| Coordinates | 579023..579640 (-) | Length | 205 a.a. |
| NCBI ID | WP_013857672.1 | Uniprot ID | Q8VQC6 |
| Organism | Vibrio anguillarum strain 87-9-116 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 574023..584640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEA93_RS02885 (CEA93_02885) | aceF | 575294..577177 (+) | 1884 | WP_013857674.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| CEA93_RS02890 (CEA93_02890) | lpdA | 577478..578905 (+) | 1428 | WP_013857673.1 | dihydrolipoyl dehydrogenase | - |
| CEA93_RS02895 (CEA93_02895) | opaR | 579023..579640 (-) | 618 | WP_013857672.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| CEA93_RS02900 (CEA93_02900) | hpt | 580012..580542 (+) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| CEA93_RS02905 (CEA93_02905) | can | 580627..581295 (-) | 669 | WP_013857670.1 | carbonate dehydratase | - |
| CEA93_RS02910 (CEA93_02910) | - | 581546..583213 (+) | 1668 | WP_038148651.1 | SulP family inorganic anion transporter | - |
| CEA93_RS02915 (CEA93_02915) | - | 583355..584275 (+) | 921 | WP_026027559.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23700.30 Da Isoelectric Point: 6.3812
>NTDB_id=235563 CEA93_RS02895 WP_013857672.1 579023..579640(-) (opaR) [Vibrio anguillarum strain 87-9-116]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDRHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDRHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=235563 CEA93_RS02895 WP_013857672.1 579023..579640(-) (opaR) [Vibrio anguillarum strain 87-9-116]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCTCT
TGAAGTGTTTGCTACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCGACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCGGCATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGTATACAAGACGAAGCCAGCAT
GGGTGTACTAGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCTCT
TGAAGTGTTTGCTACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCGACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCGGCATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGTATACAAGACGAAGCCAGCAT
GGGTGTACTAGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.683 |
98.537 |
0.805 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |