Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   CEG11_RS14845 Genome accession   NZ_CP021976
Coordinates   2986573..2987505 (-) Length   310 a.a.
NCBI ID   WP_050560672.1    Uniprot ID   A0A6A8LDH0
Organism   Bacillus velezensis strain T20E-257     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2981573..2992505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEG11_RS14810 (CEG11_14810) - 2981829..2982305 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  CEG11_RS14815 (CEG11_14815) - 2982305..2982589 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  CEG11_RS14820 (CEG11_14820) mnhG 2982573..2982947 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  CEG11_RS14825 (CEG11_14825) - 2982987..2983370 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  CEG11_RS14830 (CEG11_14830) comA 2983392..2984036 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  CEG11_RS14835 (CEG11_14835) comP 2984117..2986420 (-) 2304 WP_003152050.1 histidine kinase Regulator
  CEG11_RS14845 (CEG11_14845) comQ 2986573..2987505 (-) 933 WP_050560672.1 class 1 isoprenoid biosynthesis enzyme Regulator
  CEG11_RS14850 (CEG11_14850) degQ 2987690..2987830 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  CEG11_RS14855 (CEG11_14855) - 2988296..2988637 (+) 342 WP_003152040.1 hypothetical protein -
  CEG11_RS14860 (CEG11_14860) - 2988644..2989864 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  CEG11_RS14865 (CEG11_14865) - 2989994..2991460 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  CEG11_RS14870 (CEG11_14870) - 2991478..2992029 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35636.78 Da        Isoelectric Point: 5.4532

>NTDB_id=235522 CEG11_RS14845 WP_050560672.1 2986573..2987505(-) (comQ) [Bacillus velezensis strain T20E-257]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGESQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=235522 CEG11_RS14845 WP_050560672.1 2986573..2987505(-) (comQ) [Bacillus velezensis strain T20E-257]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAGTCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGACGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(44-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6A8LDH0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

60.9

93.226

0.568


Multiple sequence alignment