Detailed information NTG0235210

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: SPV_RS02500
• Genome accession: NZ_CP027540
• Coordinates: 475584..476633 (+)
• Length: 349 a.a.
• NCBI ID: WP_000653770.1
• Uniprot ID: Q8DQW6
• Organism: Streptococcus pneumoniae strain D39V
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 470584..481633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPV_RS02475 (SPV_2171)	-	471870..472226 (+)	357	WP_000114427.1	hypothetical protein	-
SPV_RS02480 (SPV_0461)	dnaJ	472628..473746 (+)	1119	WP_001066302.1	molecular chaperone DnaJ	-
SPV_RS02485 (SPV_0462)	-	474081..474368 (-)	288	WP_000777760.1	hypothetical protein	-
SPV_RS02490 (SPV_0463)	-	474378..474788 (-)	411	WP_001278301.1	HIT family protein	-
SPV_RS02495 (SPV_0464)	pptA	474856..475587 (+)	732	WP_000889919.1	ABC transporter ATP-binding protein	Regulator
SPV_RS02500 (SPV_0465)	pptB	475584..476633 (+)	1050	WP_000653770.1	ABC transporter permease	Regulator
SPV_RS02505 (SPV_0466)	-	476801..477130 (-)	330	WP_000132569.1	hypothetical protein	-
SPV_RS02510 (SPV_0467)	-	477406..477744 (+)	339	WP_000682124.1	LytTR family DNA-binding domain-containing protein	-
SPV_RS02515 (SPV_0468)	comE/blpR	477749..478486 (+)	738	WP_001219139.1	response regulator transcription factor	Regulator
SPV_RS02520 (SPV_0469)	-	478500..479840 (+)	1341	WP_001017622.1	sensor histidine kinase	-
SPV_RS02525 (SPV_0470)	blpC	479882..480037 (-)	156	WP_000358817.1	quorum-sensing system pheromone BlpC	-
SPV_RS02530 (SPV_0471)	-	480094..481455 (-)	1362	Protein_471	bacteriocin secretion accessory protein	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 40556.62 Da
• Isoelectric Point: 10.0008

>NTDB_id=235210 SPV_RS02500 WP_000653770.1 475584..476633(+) (pptB) [Streptococcus pneumoniae strain D39V]
MKDLFLKRKQAFRKECLGYLRYVLNDHFVLFLLVLLGFLAYQYSQLLQHFPENHWPILLFVGITSVLLLLWGGIATYMEA
PDKLFLLVGEEEIKLHLKRQTGISLVFWLFVQTLFLLLFAPLFLAMGYGLPVFLLYVLLLGVGKYFHFRQKASKFFTETG
LDWDYVISQESKRKQVLLRFFALFTQVKGISNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFAISLRLLLLS
VLAQVFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKEKGLQEVVRGLTSFVLLVELVVGLITFQE
KLALLALLGAGLVLLVLYLPYQVKRQMQD

Nucleotide

• Length: 1050 bp

>NTDB_id=235210 SPV_RS02500 WP_000653770.1 475584..476633(+) (pptB) [Streptococcus pneumoniae strain D39V]
ATGAAAGACTTGTTTTTAAAGAGAAAGCAGGCCTTTCGTAAGGAGTGTCTTGGTTATCTGCGCTATGTGCTCAATGACCA
CTTTGTCTTGTTCCTGCTTGTCCTGTTGGGCTTTCTAGCCTACCAGTACAGTCAACTCTTACAACATTTTCCTGAAAATC
ATTGGCCTATCCTTTTGTTTGTAGGAATTACGTCTGTTTTACTCTTACTTTGGGGAGGAATTGCCACCTATATGGAGGCT
CCAGACAAGCTCTTTCTCTTAGTTGGAGAAGAGGAAATCAAGCTCCATCTCAAGCGTCAAACTGGCATTTCCCTAGTCTT
TTGGCTCTTTGTACAGACCCTTTTCTTGCTGTTATTTGCGCCTTTATTTTTAGCAATGGGTTATGGCTTGCCAGTTTTTC
TGCTCTATGTGCTTTTATTGGGGGTAGGAAAATATTTCCACTTTCGTCAAAAGGCCAGCAAATTTTTTACTGAAACTGGA
CTGGACTGGGACTATGTTATTTCTCAAGAAAGCAAGCGTAAGCAAGTCTTGCTTCGTTTCTTTGCCCTCTTTACGCAGGT
CAAGGGAATTTCAAACAGCGTTAAGCGTCGTGCCTATCTGGACTTTATCTTAAAGGCTGTTCAGAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTGCGTTCTTATCTGCGAAATGGCGACCTCTTTGCTATCAGTCTTCGTCTTCTATTACTTTCC
GTACTGGCGCAGGTTTTTATCGAGCAAGCTTGGATTGCGACAGCAGTGGTAGTTCTCTTTAACTACCTCTTGCTCTTCCA
GTTGCTGGCCCTCTATCATGCCTTTGACTACCAGTATTTGACCCAACTCTTTCCGCTGGACAAGGGGCAAAAGGAAAAAG
GCTTACAGGAGGTAGTTCGAGGATTGACCAGTTTTGTTTTACTTGTGGAATTAGTTGTTGGGTTGATTACCTTCCAAGAA
AAACTGGCCCTTCTAGCCTTACTAGGAGCTGGTTTGGTTTTACTAGTCTTGTATTTGCCTTATCAGGTAAAACGTCAGAT
GCAGGACTAA

Domains

Predicted by InterProScan.

• Bacterial ABC transporter protein EcsB (EcsB) (2-156)

• Bacterial ABC transporter protein EcsB (EcsB) (158-331)

3D structure

• AlphaFold DB: Q8DQW6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus salivarius strain HSISS4	47.429	100	0.476
pptB	Streptococcus thermophilus LMD-9	46.571	100	0.467