Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   S101392_RS16475 Genome accession   NZ_CP021921
Coordinates   3175705..3178002 (-) Length   765 a.a.
NCBI ID   WP_088326847.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3170705..3183002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS16435 (S101392_03260) mrpB 3171172..3171603 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  S101392_RS16440 (S101392_03261) mrpC 3171603..3171944 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  S101392_RS16445 (S101392_03262) mrpD 3171937..3173418 (+) 1482 WP_088326845.1 Na+/H+ antiporter subunit D -
  S101392_RS16450 (S101392_03263) mrpE 3173424..3173900 (+) 477 WP_029318490.1 Na+/H+ antiporter subunit E -
  S101392_RS16455 (S101392_03264) mrpF 3173900..3174184 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  S101392_RS16460 (S101392_03265) mnhG 3174168..3174542 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  S101392_RS16465 (S101392_03266) yuxO 3174581..3174961 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  S101392_RS16470 (S101392_03267) comA 3174980..3175624 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  S101392_RS16475 (S101392_03268) comP 3175705..3178002 (-) 2298 WP_088326847.1 histidine kinase Regulator
  S101392_RS16480 (S101392_03269) comX 3178010..3178171 (-) 162 WP_049140565.1 competence pheromone ComX -
  S101392_RS16485 (S101392_03270) - 3178186..3179046 (-) 861 WP_088326849.1 polyprenyl synthetase family protein -
  S101392_RS16490 (S101392_03271) degQ 3179231..3179371 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  S101392_RS21565 - 3179593..3179718 (+) 126 WP_003228793.1 hypothetical protein -
  S101392_RS16495 (S101392_03272) - 3179834..3180202 (+) 369 WP_050258610.1 hypothetical protein -
  S101392_RS16500 (S101392_03273) pdeH 3180178..3181407 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88362.67 Da        Isoelectric Point: 8.3224

>NTDB_id=234987 S101392_RS16475 WP_088326847.1 3175705..3178002(-) (comP) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MKSRNNKISVVLVVLSLIYVIYLTYISNNNLLVGATVSKGKNGDIVITNVDEFSMASYSGIEKGDIVKSINNKKINTNEI
KMNKLKNVSSMIVERNGHNLELKMTLFNDKNFPTYLIPLIFYIVCLFCCFFILKINESKNLLSAVVLIIFLLSASIAFIS
AGGSAKGDMLSRLIMVVTLISVPLNYLLFLYQYFKELGTKLFNKKVFILYLIPVINVVCEIFRSHLFFRDYVPKLNLLAF
FFLFIIVGVYFSIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMLLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDDENVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLSDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=234987 S101392_RS16475 WP_088326847.1 3175705..3178002(-) (comP) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGAAGTCTAGAAATAACAAAATTTCTGTAGTGTTAGTTGTATTAAGTTTGATTTATGTTATTTATTTGACTTATATTAG
TAATAATAATTTATTAGTAGGGGCAACTGTCTCTAAAGGAAAAAATGGCGATATTGTAATTACCAATGTAGATGAATTTT
CAATGGCTTCATACAGCGGTATAGAAAAAGGAGATATCGTAAAGAGTATTAATAATAAAAAGATAAACACAAACGAAATA
AAAATGAACAAACTAAAAAATGTAAGTTCGATGATTGTGGAAAGAAATGGACATAATCTTGAGTTGAAAATGACCTTATT
TAATGATAAAAATTTCCCTACTTACTTAATACCGTTAATATTTTATATTGTTTGTTTATTTTGTTGCTTTTTTATATTAA
AAATAAATGAATCAAAGAACCTTCTCTCAGCTGTAGTTTTAATTATCTTTCTGTTGTCTGCCTCTATTGCATTTATAAGT
GCTGGAGGGTCTGCTAAGGGAGATATGCTGAGCAGGCTTATAATGGTGGTAACATTAATATCTGTTCCGCTAAACTATCT
TCTCTTTCTTTATCAATATTTCAAAGAATTAGGAACCAAATTATTTAATAAGAAAGTTTTTATTTTATATTTGATTCCGG
TCATAAATGTAGTTTGTGAAATTTTTCGTTCACATCTTTTCTTTCGAGATTATGTTCCTAAATTAAATTTACTTGCTTTT
TTCTTTTTATTTATTATAGTAGGGGTTTATTTTAGTATCATACTAATTAAAAATAAAGACACTGAACAAGCACATATTAT
TAAGGTTCTCACTATCATTAATATCTTTTCTTTTTCGCCTTTTCTGTGTTTATATTTGATACCTTACGTGTTTTTAAATG
CACATTATGTTTCTTCTTTTTTAGCGGCTTCATTTATGCTGCTGATACCATTCTCATTGGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCAGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTATCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTAATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGAGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTC
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGGAAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.938

100

0.595


Multiple sequence alignment