Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | S101392_RS12885 | Genome accession | NZ_CP021921 |
| Coordinates | 2508182..2509219 (-) | Length | 345 a.a. |
| NCBI ID | WP_015714257.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis strain SRCM101392 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2503182..2514219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101392_RS12835 (S101392_02554) | tasA | 2503280..2504065 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| S101392_RS12840 (S101392_02555) | sipW | 2504129..2504701 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| S101392_RS12845 (S101392_02556) | tapA | 2504685..2505446 (-) | 762 | WP_088326478.1 | amyloid fiber anchoring/assembly protein TapA | - |
| S101392_RS12850 (S101392_02557) | yqzG | 2505718..2506044 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| S101392_RS12855 (S101392_02558) | spoIITA | 2506086..2506265 (-) | 180 | WP_072175549.1 | YqzE family protein | - |
| S101392_RS12860 (S101392_02559) | comGG | 2506336..2506710 (-) | 375 | WP_029317914.1 | ComG operon protein ComGG | Machinery gene |
| S101392_RS12865 | comGF | 2506711..2507094 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| S101392_RS12870 (S101392_02561) | comGE | 2507120..2507467 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| S101392_RS12875 (S101392_02562) | comGD | 2507451..2507882 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| S101392_RS12880 (S101392_02563) | comGC | 2507872..2508168 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| S101392_RS12885 (S101392_02564) | comGB | 2508182..2509219 (-) | 1038 | WP_015714257.1 | comG operon protein ComGB | Machinery gene |
| S101392_RS12890 (S101392_02565) | comGA | 2509206..2510276 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| S101392_RS12900 (S101392_02568) | corA | 2510688..2511641 (-) | 954 | WP_088326481.1 | magnesium transporter CorA | - |
| S101392_RS12905 (S101392_02569) | yqhB | 2511784..2513112 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| S101392_RS12910 (S101392_02570) | rsbRD | 2513165..2514001 (-) | 837 | WP_038429294.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39733.22 Da Isoelectric Point: 9.7900
>NTDB_id=234971 S101392_RS12885 WP_015714257.1 2508182..2509219(-) (comGB) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=234971 S101392_RS12885 WP_015714257.1 2508182..2509219(-) (comGB) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACTTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACTTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |