Detailed information NTG0234909

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: S101395_RS17995
• Genome accession: NZ_CP021920
• Coordinates: 3408898..3409866 (-)
• Length: 322 a.a.
• NCBI ID: WP_006636819.1
• Uniprot ID: M5P9I1
• Organism: Bacillus sonorensis strain SRCM101395
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3403898..3414866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101395_RS17965 (S101395_03619)	-	3404035..3405009 (-)	975	WP_006636825.1	ABC transporter ATP-binding protein	-
S101395_RS17970 (S101395_03620)	-	3405188..3405976 (-)	789	WP_088272957.1	DUF2268 domain-containing protein	-
S101395_RS17975 (S101395_03621)	fabF	3406057..3407295 (-)	1239	WP_006636823.1	beta-ketoacyl-ACP synthase II	-
S101395_RS17980 (S101395_03622)	-	3407317..3408255 (-)	939	WP_006636822.1	beta-ketoacyl-ACP synthase III	-
S101395_RS17985 (S101395_03623)	-	3408425..3408676 (+)	252	WP_006636821.1	hypothetical protein	-
S101395_RS17990 (S101395_03624)	comZ	3408720..3408908 (-)	189	WP_006636820.1	ComZ family protein	Regulator
S101395_RS17995 (S101395_03625)	med	3408898..3409866 (-)	969	WP_006636819.1	BMP family ABC transporter substrate-binding protein	Regulator
S101395_RS18000 (S101395_03626)	-	3409952..3410524 (-)	573	WP_006636818.1	hypothetical protein	-
S101395_RS18005 (S101395_03627)	-	3410616..3411350 (-)	735	WP_006636817.1	hypothetical protein	-
S101395_RS18010 (S101395_03628)	-	3411589..3411774 (+)	186	WP_006636816.1	YjzD family protein	-
S101395_RS18015 (S101395_03629)	-	3411854..3412033 (-)	180	WP_006636815.1	YjzC family protein	-
S101395_RS18020 (S101395_03630)	argF	3412167..3413117 (-)	951	WP_006636814.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 322 a.a.
• Molecular weight: 35662.61 Da
• Isoelectric Point: 5.2692

>NTDB_id=234909 S101395_RS17995 WP_006636819.1 3408898..3409866(-) (med) [Bacillus sonorensis strain SRCM101395]
MVYRLGVIFLILLVMSGCGQTPLNGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNEAAVKMAVED
FQKKGVNLIFGHGSEYEKVFNSISGNYPDIHFVLVNSKAEHKNVTSITFDGRAMGFFGGMTAAHQSKSGKLGILATHSWQ
PEVKGFIEGAKYINPDIKVKTEYVGQWDDSEKAVAKYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENIVLTSTIQHVDEAYELIADEFNKGTLKGGRRIFDIQDGVIEMGEFSPIVDQSFQEKIKGLIEQYKKQENCQMRGDPD
AA

Nucleotide

• Length: 969 bp

>NTDB_id=234909 S101395_RS17995 WP_006636819.1 3408898..3409866(-) (med) [Bacillus sonorensis strain SRCM101395]
ATGGTGTACAGGCTTGGCGTGATTTTTTTGATTCTCCTTGTCATGAGCGGCTGCGGACAAACGCCGCTGAATGGGAAAAT
TGAAAAAGTCGGGTTGCTTGTCCCTGATACAATAAGCGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAGTCTGTCTACAATGTCGATGTCTATTATAAAGAAGGAATCGATAATGAAGCCGCAGTCAAAATGGCTGTAGAAGAC
TTTCAGAAAAAAGGCGTCAACTTAATTTTCGGACATGGAAGCGAATATGAAAAAGTGTTTAACAGCATAAGCGGAAACTA
TCCCGATATTCATTTTGTGCTGGTGAACAGCAAAGCCGAGCATAAAAATGTGACAAGCATCACCTTTGACGGAAGGGCGA
TGGGGTTTTTTGGCGGCATGACCGCTGCACATCAATCAAAGTCGGGGAAACTCGGCATACTGGCCACACATTCGTGGCAG
CCTGAAGTGAAAGGATTCATCGAAGGTGCGAAATACATCAATCCGGACATTAAGGTCAAAACAGAATATGTCGGGCAGTG
GGACGACTCCGAAAAGGCCGTCGCCAAGTATGAAAAGATGAAAAAAGCGGGCGCGGATGTTGTGTATCCCGCCGGGGACG
GGTATAATGTCCCTGTCATAGAACAAATCAAAAAAGACGGTCTTTATGCGATCGGCTATGTCAGCGACCAGTCGGAGCTG
GGCGAGAACATCGTGCTCACAAGCACCATTCAGCATGTTGATGAAGCTTATGAGCTCATCGCAGACGAATTCAATAAAGG
GACGCTTAAGGGCGGCCGGCGGATTTTTGACATTCAGGACGGTGTGATAGAGATGGGCGAATTCAGCCCGATTGTCGATC
AGTCATTCCAGGAAAAAATAAAAGGGCTTATCGAACAATACAAAAAACAGGAAAACTGCCAAATGAGAGGTGATCCAGAT
GCAGCATGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-309)

3D structure

• AlphaFold DB: M5P9I1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	66.343	95.963	0.637