Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   S101395_RS16545 Genome accession   NZ_CP021920
Coordinates   3141747..3142208 (+) Length   153 a.a.
NCBI ID   WP_006638395.1    Uniprot ID   M5P514
Organism   Bacillus sonorensis strain SRCM101395     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3136747..3147208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101395_RS16525 (S101395_03333) fadH 3137774..3138538 (-) 765 WP_006638391.1 2,4-dienoyl-CoA reductase -
  S101395_RS16530 (S101395_03334) - 3138682..3139545 (+) 864 WP_006638392.1 metallophosphoesterase -
  S101395_RS16535 (S101395_03335) - 3139727..3140221 (+) 495 WP_081605382.1 L,D-transpeptidase family protein -
  S101395_RS16540 (S101395_03336) - 3140306..3141607 (+) 1302 WP_006638394.1 MFS transporter -
  S101395_RS16545 (S101395_03337) kre 3141747..3142208 (+) 462 WP_006638395.1 YkyB family protein Regulator
  S101395_RS16550 (S101395_03338) - 3142236..3143156 (-) 921 WP_006638396.1 chemotaxis protein -
  S101395_RS16555 (S101395_03339) - 3143219..3144535 (-) 1317 WP_006638397.1 MFS transporter -
  S101395_RS16560 (S101395_03340) - 3144615..3145136 (-) 522 WP_006638398.1 RDD family protein -
  S101395_RS25695 (S101395_03341) - 3145310..3145465 (+) 156 WP_162148085.1 hypothetical protein -
  S101395_RS16565 (S101395_03342) - 3145654..3146834 (+) 1181 Protein_3260 aminotransferase A -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17621.37 Da        Isoelectric Point: 10.5181

>NTDB_id=234901 S101395_RS16545 WP_006638395.1 3141747..3142208(+) (kre) [Bacillus sonorensis strain SRCM101395]
MDDHNHTKELKPTIENLSKAIYTVNRHAKTATDPKYLYLLKKKALQKLINEGKGKKVGLHFSKNPKFSQQQSDVLISLGD
YFFHMPPTKEDFDNLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGLKEKPLVTNRKRSSAKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=234901 S101395_RS16545 WP_006638395.1 3141747..3142208(+) (kre) [Bacillus sonorensis strain SRCM101395]
ATGGACGACCATAATCATACTAAAGAATTAAAACCAACCATCGAAAACCTTTCAAAAGCGATTTACACGGTCAATCGTCA
TGCTAAAACCGCGACCGATCCCAAATACCTGTATCTCCTGAAAAAGAAAGCTTTACAAAAGCTCATCAATGAAGGAAAAG
GTAAAAAGGTAGGACTTCACTTTTCGAAAAACCCAAAATTCAGCCAGCAACAGTCAGATGTGCTCATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACCAAAGAAGACTTCGATAACCTTCCGCACTTAGGTACACTAAATCATTCTTATCGGAA
TCCAAAAGCTCATATGTCATTGAACATAGCGAAGCAGCTGCTTCAAAACTACACGGGATTGAAGGAGAAGCCGCTCGTCA
CGAACCGAAAGCGCTCTTCTGCAAAGCCTGTATTCAAGAAGCTTGGCGAAAGTTATTTTTAA

Domains


Predicted by InterproScan.

(13-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB M5P514

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

79.221

100

0.797


Multiple sequence alignment