Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   S101395_RS15040 Genome accession   NZ_CP021920
Coordinates   2843671..2844921 (-) Length   416 a.a.
NCBI ID   WP_006638100.1    Uniprot ID   M5PCX3
Organism   Bacillus sonorensis strain SRCM101395     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2838671..2849921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101395_RS15020 (S101395_03031) spoVS 2839159..2839419 (-) 261 WP_003181955.1 stage V sporulation protein SpoVS -
  S101395_RS15025 - 2839622..2840418 (-) 797 Protein_2951 TIGR00282 family metallophosphoesterase -
  S101395_RS15030 (S101395_03034) rny 2840504..2842063 (-) 1560 WP_006638098.1 ribonuclease Y -
  S101395_RS15035 (S101395_03035) recA 2842443..2843489 (-) 1047 WP_006638099.1 recombinase RecA Machinery gene
  S101395_RS15040 (S101395_03036) cinA 2843671..2844921 (-) 1251 WP_006638100.1 competence/damage-inducible protein A Machinery gene
  S101395_RS15045 (S101395_03037) pgsA 2844942..2845523 (-) 582 WP_006638101.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  S101395_RS15050 (S101395_03038) - 2845585..2846493 (-) 909 WP_006638102.1 helix-turn-helix domain-containing protein -
  S101395_RS15055 (S101395_03039) - 2846511..2847302 (-) 792 WP_006638103.1 YmfK family protein -
  S101395_RS15060 (S101395_03040) - 2847566..2847823 (-) 258 WP_006638104.1 DUF3243 domain-containing protein -
  S101395_RS15065 (S101395_03041) ymfI 2847893..2848624 (-) 732 WP_006638105.1 elongation factor P 5-aminopentanone reductase -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45416.68 Da        Isoelectric Point: 5.0688

>NTDB_id=234896 S101395_RS15040 WP_006638100.1 2843671..2844921(-) (cinA) [Bacillus sonorensis strain SRCM101395]
MKLERKAEIIAVGSELLLGQIANTNAQFISKQLAEIGINVFYHTAVGDNPERLKQVIKTAQERSDFIIFSGGLGPTKDDL
TKETIAEVVGRPLQLDEEAFQSIEDYFKKTNRTMSPNNRKQALILEGSDVLPNRFGMAPGMLLEHESRFYMLLPGPPKEL
NPMFENEAKPLILEKLGSKEKIVSRVLRFFGIGESQLETDLEDLIDAQTNPTIAPLAADGEVTLRLTAKHADPAETERLL
KETEDRILERVGEFFYGYDDTSLVEELAKACVRKGMTLSAAESFTGGLFSSWLTELSGASEYFRGGAVCYTNELKVSAAG
VSEETLNRFGAVSAECAKELAAGIRNKTGSDIGISFTGVAGPNTQEGHPAGKVFIGVSVNGKAEEVHEFMFAGSRSAVRK
RSAKYGCHLLLNVLGK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=234896 S101395_RS15040 WP_006638100.1 2843671..2844921(-) (cinA) [Bacillus sonorensis strain SRCM101395]
ATGAAACTGGAAAGAAAAGCTGAAATCATTGCCGTCGGTTCAGAGCTTTTGCTTGGGCAAATTGCCAATACGAACGCGCA
GTTTATCAGCAAGCAGCTCGCGGAAATCGGCATCAATGTTTTTTATCATACAGCGGTTGGAGACAATCCCGAACGCTTGA
AGCAAGTGATTAAAACCGCGCAGGAAAGGTCTGATTTCATCATCTTTTCCGGCGGGCTCGGGCCGACGAAAGACGATTTG
ACAAAAGAAACGATCGCCGAGGTCGTCGGACGTCCGCTTCAGCTTGATGAAGAAGCCTTTCAATCGATTGAGGATTATTT
CAAAAAAACGAACCGCACGATGTCACCGAACAATCGGAAGCAGGCACTGATCCTCGAAGGGTCTGATGTATTGCCAAACC
GGTTCGGCATGGCCCCGGGGATGCTTTTGGAGCATGAATCCCGCTTTTACATGCTTCTTCCCGGACCTCCGAAAGAGCTG
AACCCAATGTTTGAAAACGAAGCGAAGCCGCTCATTCTTGAAAAACTGGGCTCAAAGGAAAAAATCGTCTCAAGGGTGCT
TCGGTTCTTCGGAATCGGAGAATCCCAGCTTGAAACGGATTTGGAAGACCTTATTGACGCTCAGACTAACCCGACGATCG
CGCCTTTGGCGGCCGATGGGGAAGTGACCCTCAGGCTGACGGCCAAACACGCGGATCCGGCTGAGACGGAACGCCTTCTT
AAAGAAACGGAAGACCGGATTTTAGAGCGTGTTGGGGAGTTCTTTTACGGATATGACGATACTTCGCTTGTTGAAGAGCT
TGCGAAAGCCTGCGTCCGCAAAGGGATGACGCTGTCTGCCGCGGAAAGCTTTACAGGCGGGCTGTTTTCGAGCTGGCTGA
CGGAGCTCAGCGGAGCCTCCGAATATTTCAGAGGAGGAGCCGTCTGCTACACAAACGAATTGAAAGTTTCAGCGGCAGGA
GTTTCCGAAGAAACGCTGAACCGCTTCGGAGCCGTCAGCGCGGAATGCGCGAAGGAGCTCGCAGCAGGCATCAGAAACAA
AACCGGAAGCGACATCGGCATCAGCTTTACCGGAGTAGCCGGTCCGAATACGCAGGAAGGCCATCCCGCAGGAAAGGTAT
TTATCGGGGTCTCTGTGAACGGCAAAGCAGAAGAGGTGCATGAATTCATGTTTGCCGGCTCCAGATCCGCGGTCAGGAAG
CGTTCCGCCAAATACGGCTGCCATCTGCTGCTGAATGTGCTGGGAAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(261-413)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)

Damage-inducible protein CinA KH domain (CinA_KH)

(184-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5PCX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

80.435

99.519

0.8
  cinA Streptococcus mitis SK321

45.455

100

0.457
  cinA Streptococcus mitis NCTC 12261

45.455

100

0.457
  cinA Streptococcus pneumoniae TIGR4

45.455

100

0.457
  cinA Streptococcus mutans UA159

46.005

99.279

0.457
  cinA Streptococcus pneumoniae Rx1

45.215

100

0.454
  cinA Streptococcus pneumoniae R6

45.215

100

0.454
  cinA Streptococcus pneumoniae D39

44.976

100

0.452
  cinA Streptococcus suis isolate S10

42.175

90.625

0.382

Multiple sequence alignment