Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | S101395_RS09255 | Genome accession | NZ_CP021920 |
| Coordinates | 1749035..1750102 (+) | Length | 355 a.a. |
| NCBI ID | WP_006637540.1 | Uniprot ID | - |
| Organism | Bacillus sonorensis strain SRCM101395 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1744035..1755102
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101395_RS09215 (S101395_01866) | - | 1744484..1745593 (+) | 1110 | WP_029419374.1 | hypothetical protein | - |
| S101395_RS09220 (S101395_01867) | - | 1745608..1745922 (+) | 315 | WP_006637546.1 | MTH1187 family thiamine-binding protein | - |
| S101395_RS09225 (S101395_01868) | - | 1745980..1746153 (-) | 174 | WP_006637545.1 | DUF2759 domain-containing protein | - |
| S101395_RS09230 (S101395_01869) | - | 1746294..1746932 (+) | 639 | WP_006637544.1 | MBL fold metallo-hydrolase | - |
| S101395_RS09235 (S101395_01870) | - | 1746982..1747227 (-) | 246 | WP_006637543.1 | DUF2626 domain-containing protein | - |
| S101395_RS09240 (S101395_01871) | - | 1747440..1747820 (+) | 381 | WP_006637542.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| S101395_RS09250 (S101395_01873) | - | 1748039..1748896 (+) | 858 | WP_006637541.1 | STAS domain-containing protein | - |
| S101395_RS09255 (S101395_01874) | comGA | 1749035..1750102 (+) | 1068 | WP_006637540.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| S101395_RS09260 (S101395_01875) | comGB | 1750089..1751126 (+) | 1038 | WP_006637539.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| S101395_RS09265 (S101395_01876) | - | 1751192..1752724 (-) | 1533 | WP_167373791.1 | recombinase family protein | - |
| S101395_RS09270 (S101395_01877) | - | 1752772..1753680 (-) | 909 | WP_208620356.1 | hypothetical protein | - |
| S101395_RS09280 (S101395_01879) | - | 1753936..1754436 (-) | 501 | WP_088272793.1 | ImmA/IrrE family metallo-endopeptidase | - |
| S101395_RS09285 (S101395_01880) | - | 1754627..1754974 (-) | 348 | WP_088272794.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 39821.31 Da Isoelectric Point: 9.4732
>NTDB_id=234886 S101395_RS09255 WP_006637540.1 1749035..1750102(+) (comGA) [Bacillus sonorensis strain SRCM101395]
MQAIEPLSGRVIEEACRMRASDIHIVPCKKEAIIRFRIDGELIQKDRLTRLECSRLISHFKFLSSMDIGERRQPQSGALT
LQVNNKPVHLRMSTLPTVYDESLVIRVLPQASAPPLRSLSLFPDATSKLLSFLKHSHGLMIFTGPTGSGKTTTLYSLIEY
AKQHFNRNIITLEDPVESRSEHVLQVQVNEKAGMTYSAGLKAVLRHDPDMIILGEIRDAETAKTAVRAALTGHLVLSSMH
AKNAKGAIYRLLEFGVTMTEIEQTLVAVSAQRLVNLVCPFCGEQCSFYCRMAREVRRASIFELLYGKSLNLCIKEAKGAY
VNNRFDTLRKLIRKGIALGYVPAGSYERWVHHEAD
MQAIEPLSGRVIEEACRMRASDIHIVPCKKEAIIRFRIDGELIQKDRLTRLECSRLISHFKFLSSMDIGERRQPQSGALT
LQVNNKPVHLRMSTLPTVYDESLVIRVLPQASAPPLRSLSLFPDATSKLLSFLKHSHGLMIFTGPTGSGKTTTLYSLIEY
AKQHFNRNIITLEDPVESRSEHVLQVQVNEKAGMTYSAGLKAVLRHDPDMIILGEIRDAETAKTAVRAALTGHLVLSSMH
AKNAKGAIYRLLEFGVTMTEIEQTLVAVSAQRLVNLVCPFCGEQCSFYCRMAREVRRASIFELLYGKSLNLCIKEAKGAY
VNNRFDTLRKLIRKGIALGYVPAGSYERWVHHEAD
Nucleotide
Download Length: 1068 bp
>NTDB_id=234886 S101395_RS09255 WP_006637540.1 1749035..1750102(+) (comGA) [Bacillus sonorensis strain SRCM101395]
TTGCAAGCGATTGAACCATTAAGCGGGAGAGTAATCGAAGAGGCATGCAGAATGAGAGCATCTGACATTCATATTGTTCC
GTGTAAAAAAGAGGCGATTATCCGTTTTAGAATCGACGGTGAATTGATTCAAAAGGACAGGCTGACGAGGCTTGAGTGCT
CAAGGCTGATTTCCCACTTTAAATTTCTTTCTTCAATGGATATCGGAGAACGGAGACAGCCGCAAAGCGGTGCTTTAACC
CTTCAAGTGAACAATAAGCCTGTTCATTTAAGAATGTCGACTTTGCCCACTGTATACGATGAAAGCTTGGTGATCCGCGT
TTTGCCGCAAGCAAGTGCCCCGCCGCTCAGAAGCCTGTCATTGTTTCCGGATGCAACGTCGAAGCTGCTGTCTTTTCTGA
AGCATTCACACGGCCTGATGATCTTCACCGGCCCTACAGGTTCGGGAAAAACGACAACTCTGTATTCGCTAATCGAATAT
GCAAAACAGCATTTTAACCGCAATATTATTACCCTGGAGGATCCGGTGGAATCCAGAAGCGAGCATGTTCTTCAAGTACA
GGTAAATGAGAAGGCGGGTATGACATATTCTGCCGGCTTAAAGGCTGTTCTCCGCCATGATCCGGACATGATCATTCTGG
GGGAAATCCGCGATGCAGAAACAGCCAAAACCGCGGTCAGAGCGGCGCTGACGGGTCATCTTGTATTATCGAGCATGCAC
GCGAAAAACGCAAAAGGCGCGATATACAGACTGCTTGAATTCGGCGTCACAATGACAGAAATTGAACAGACGCTGGTTGC
TGTAAGCGCGCAACGACTCGTCAATCTTGTCTGTCCATTTTGCGGAGAGCAGTGTTCTTTTTATTGCAGAATGGCGAGGG
AAGTCAGAAGAGCAAGCATTTTTGAGCTTCTGTATGGAAAGAGCCTGAATCTTTGTATAAAAGAAGCTAAAGGCGCATAT
GTAAACAACCGCTTCGACACATTGAGAAAATTGATCCGCAAAGGGATAGCGCTCGGTTATGTGCCGGCCGGATCTTATGA
ACGCTGGGTGCATCATGAAGCCGATTAA
TTGCAAGCGATTGAACCATTAAGCGGGAGAGTAATCGAAGAGGCATGCAGAATGAGAGCATCTGACATTCATATTGTTCC
GTGTAAAAAAGAGGCGATTATCCGTTTTAGAATCGACGGTGAATTGATTCAAAAGGACAGGCTGACGAGGCTTGAGTGCT
CAAGGCTGATTTCCCACTTTAAATTTCTTTCTTCAATGGATATCGGAGAACGGAGACAGCCGCAAAGCGGTGCTTTAACC
CTTCAAGTGAACAATAAGCCTGTTCATTTAAGAATGTCGACTTTGCCCACTGTATACGATGAAAGCTTGGTGATCCGCGT
TTTGCCGCAAGCAAGTGCCCCGCCGCTCAGAAGCCTGTCATTGTTTCCGGATGCAACGTCGAAGCTGCTGTCTTTTCTGA
AGCATTCACACGGCCTGATGATCTTCACCGGCCCTACAGGTTCGGGAAAAACGACAACTCTGTATTCGCTAATCGAATAT
GCAAAACAGCATTTTAACCGCAATATTATTACCCTGGAGGATCCGGTGGAATCCAGAAGCGAGCATGTTCTTCAAGTACA
GGTAAATGAGAAGGCGGGTATGACATATTCTGCCGGCTTAAAGGCTGTTCTCCGCCATGATCCGGACATGATCATTCTGG
GGGAAATCCGCGATGCAGAAACAGCCAAAACCGCGGTCAGAGCGGCGCTGACGGGTCATCTTGTATTATCGAGCATGCAC
GCGAAAAACGCAAAAGGCGCGATATACAGACTGCTTGAATTCGGCGTCACAATGACAGAAATTGAACAGACGCTGGTTGC
TGTAAGCGCGCAACGACTCGTCAATCTTGTCTGTCCATTTTGCGGAGAGCAGTGTTCTTTTTATTGCAGAATGGCGAGGG
AAGTCAGAAGAGCAAGCATTTTTGAGCTTCTGTATGGAAAGAGCCTGAATCTTTGTATAAAAGAAGCTAAAGGCGCATAT
GTAAACAACCGCTTCGACACATTGAGAAAATTGATCCGCAAAGGGATAGCGCTCGGTTATGTGCCGGCCGGATCTTATGA
ACGCTGGGTGCATCATGAAGCCGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
67.978 |
100 |
0.682 |