Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | S101395_RS03025 | Genome accession | NZ_CP021920 |
| Coordinates | 586214..587371 (+) | Length | 385 a.a. |
| NCBI ID | WP_006639267.1 | Uniprot ID | M5P1Q6 |
| Organism | Bacillus sonorensis strain SRCM101395 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 581214..592371
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101395_RS03005 (S101395_00607) | tuaH | 581747..582928 (+) | 1182 | WP_006639271.1 | teichuronic acid biosynthesis protein TuaH | - |
| S101395_RS03010 (S101395_00608) | - | 583051..584115 (+) | 1065 | WP_006639270.1 | glycosyltransferase family 4 protein | - |
| S101395_RS03015 (S101395_00609) | - | 584258..585337 (-) | 1080 | WP_006639269.1 | LCP family protein | - |
| S101395_RS03020 (S101395_00610) | - | 585354..585992 (-) | 639 | WP_006639268.1 | YigZ family protein | - |
| S101395_RS03025 (S101395_00611) | degS | 586214..587371 (+) | 1158 | WP_006639267.1 | sensor histidine kinase | Regulator |
| S101395_RS03030 (S101395_00612) | degU | 587453..588142 (+) | 690 | WP_003185730.1 | two-component system response regulator DegU | Regulator |
| S101395_RS03035 (S101395_00613) | - | 588262..589104 (+) | 843 | WP_006639266.1 | DegV family protein | - |
| S101395_RS03040 (S101395_00614) | comFA | 589297..590643 (+) | 1347 | WP_006639265.1 | DEAD/DEAH box helicase | Machinery gene |
| S101395_RS03045 (S101395_00615) | - | 590700..590984 (+) | 285 | WP_006639264.1 | late competence development ComFB family protein | - |
| S101395_RS26895 (S101395_00616) | comFC | 590941..591675 (+) | 735 | WP_006639263.1 | ComF family protein | Machinery gene |
| S101395_RS03055 (S101395_00617) | - | 591733..592152 (+) | 420 | WP_006639262.1 | TIGR03826 family flagellar region protein | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44603.33 Da Isoelectric Point: 7.0403
>NTDB_id=234869 S101395_RS03025 WP_006639267.1 586214..587371(+) (degS) [Bacillus sonorensis strain SRCM101395]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEAEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAKSKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEAEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAKSKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=234869 S101395_RS03025 WP_006639267.1 586214..587371(+) (degS) [Bacillus sonorensis strain SRCM101395]
GTGAGTGTTTCCAAAATGGACTCCAAAGTCTTAGATTCAATTATTATGAAAATGTTAAAAACCGTGGACGGGAGCAAAGA
TGAAGTCTTTCAAATCGGCGAACAATCCCGCCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATAAAGCAGCAGG
TCAACGAAGTCATTGATCTCGGAGACAGATTAGAGGTACATGCCAGGCATGCGAGGAACCGTTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGCGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTAGAGCTGACGATGAT
TCAGCAGCGCGAAAAACAGCTTAGAGAGAAACGCGACGATCTGGAAAGGCGCCTCCTTGGCCTTCAGGAAATCATTGAAC
GTTCCGAAGGGCTTGTCAGTCAAATTACAGTTGTCTTAAACTATTTAAACCAAGACTTGCGCCAAGTTGGCGTTTTATTG
GAAGATGCACAGGCAAAACAGGATTTCGGTCTTCGAATTATCGAAGCGCAGGAAGAAGAAAGAAAAAGAGTGTCGCGTGA
GATTCACGACGGCCCAGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTGATAGAACGGATATTCAGGGACAAGG
GAACGGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGAAATGCCCTTTATGAAGTCAGACGGATCATA
TATGATTTAAGGCCGATGGCTTTAGATGACCTGGGGCTAATTCCGACGCTCAGAAAGTATTTGAACACAATCGAAGATTA
TCATGGGAAAGCGAAAATTCATTTCCATTGTATCGGGGAATCTGAAGAAAGACGAATTGCACCGCGCTTTGAGGTGGCGC
TTTTCAGGCTTGCTCAAGAAGCGGTCACAAATGCCCTGAAACATTCCGAATCGACCGAAATTCATGTTAAAGTAGAAGTA
ACGAAAGATTTTGTTACTCTGATTATAAAGGATAACGGAAACGGCTTTGATTTAAAAGAAGCGAAAAGCAAGAAAAACAA
ATCTTTCGGTCTGCTCGGGATGAAGGAAAGAGTCGATTTGCTTGAAGGGACAATGACGATTGATTCAAAAATAGGTCTCG
GGACATTTATTTTGATTAAAGTTCCGCTTTCATTGTAA
GTGAGTGTTTCCAAAATGGACTCCAAAGTCTTAGATTCAATTATTATGAAAATGTTAAAAACCGTGGACGGGAGCAAAGA
TGAAGTCTTTCAAATCGGCGAACAATCCCGCCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATAAAGCAGCAGG
TCAACGAAGTCATTGATCTCGGAGACAGATTAGAGGTACATGCCAGGCATGCGAGGAACCGTTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGCGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTAGAGCTGACGATGAT
TCAGCAGCGCGAAAAACAGCTTAGAGAGAAACGCGACGATCTGGAAAGGCGCCTCCTTGGCCTTCAGGAAATCATTGAAC
GTTCCGAAGGGCTTGTCAGTCAAATTACAGTTGTCTTAAACTATTTAAACCAAGACTTGCGCCAAGTTGGCGTTTTATTG
GAAGATGCACAGGCAAAACAGGATTTCGGTCTTCGAATTATCGAAGCGCAGGAAGAAGAAAGAAAAAGAGTGTCGCGTGA
GATTCACGACGGCCCAGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTGATAGAACGGATATTCAGGGACAAGG
GAACGGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGAAATGCCCTTTATGAAGTCAGACGGATCATA
TATGATTTAAGGCCGATGGCTTTAGATGACCTGGGGCTAATTCCGACGCTCAGAAAGTATTTGAACACAATCGAAGATTA
TCATGGGAAAGCGAAAATTCATTTCCATTGTATCGGGGAATCTGAAGAAAGACGAATTGCACCGCGCTTTGAGGTGGCGC
TTTTCAGGCTTGCTCAAGAAGCGGTCACAAATGCCCTGAAACATTCCGAATCGACCGAAATTCATGTTAAAGTAGAAGTA
ACGAAAGATTTTGTTACTCTGATTATAAAGGATAACGGAAACGGCTTTGATTTAAAAGAAGCGAAAAGCAAGAAAAACAA
ATCTTTCGGTCTGCTCGGGATGAAGGAAAGAGTCGATTTGCTTGAAGGGACAATGACGATTGATTCAAAAATAGGTCTCG
GGACATTTATTTTGATTAAAGTTCCGCTTTCATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
89.351 |
100 |
0.894 |