Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | S101395_RS00600 | Genome accession | NZ_CP021920 |
| Coordinates | 108044..110476 (+) | Length | 810 a.a. |
| NCBI ID | WP_006640291.1 | Uniprot ID | - |
| Organism | Bacillus sonorensis strain SRCM101395 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 103044..115476
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101395_RS00585 (S101395_00116) | - | 105920..106384 (+) | 465 | WP_006640288.1 | CtsR family transcriptional regulator | - |
| S101395_RS00590 (S101395_00117) | - | 106399..106956 (+) | 558 | WP_006640289.1 | UvrB/UvrC motif-containing protein | - |
| S101395_RS00595 (S101395_00118) | - | 106956..108047 (+) | 1092 | WP_006640290.1 | protein arginine kinase | - |
| S101395_RS00600 (S101395_00119) | clpC | 108044..110476 (+) | 2433 | WP_006640291.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| S101395_RS00605 (S101395_00120) | radA | 110552..111931 (+) | 1380 | WP_006640292.1 | DNA repair protein RadA | Machinery gene |
| S101395_RS00610 (S101395_00121) | disA | 111935..113011 (+) | 1077 | WP_006640293.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| S101395_RS00615 (S101395_00122) | - | 113141..114229 (+) | 1089 | WP_006640294.1 | PIN/TRAM domain-containing protein | - |
| S101395_RS00620 (S101395_00123) | ispD | 114245..114940 (+) | 696 | WP_006640295.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| S101395_RS00625 (S101395_00124) | ispF | 114933..115409 (+) | 477 | WP_006640296.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90141.72 Da Isoelectric Point: 5.9765
>NTDB_id=234863 S101395_RS00600 WP_006640291.1 108044..110476(+) (clpC) [Bacillus sonorensis strain SRCM101395]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGGASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVENGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGGASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVENGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=234863 S101395_RS00600 WP_006640291.1 108044..110476(+) (clpC) [Bacillus sonorensis strain SRCM101395]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCCCTTGCCCAGGAAGAGGCTCTGCGTCTCGGGCATAA
TAATATTGGAACTGAACATATCCTGCTGGGCCTTGTCCGCGAAGGTGAAGGAATCGCGGCAAAAGCGCTGCAGGCGCTGG
GGCTGAGCCCTGATAAAATTCAAAAAGAGGTAGAAAGCCTGATTGGCCGGGGGCAGGAAATGTCCCAGTCGATCCACTAC
ACACCTAGGGCGAAAAAAGTAACAGAACTAGCGATGGATGAAGCGAGAAAGCTCGGCCATTCATATGTCGGAACCGAGCA
CATCCTCCTGGGATTAATACGTGAAGGCGAAGGCGTCGCTGCCAGAGTGCTGAATAATCTGGGCGTCAGCTTAAATAAAG
CAAGACAACAGGTGCTGCAGCTTTTGGGCAGCAATGAAAGCGGAGGAGGCGCCTCAGGTGCTAACAGCAATGCCAACACA
CCTACTTTGGACAGTCTCGCACGTGATTTAACCGCTATTGCTAAAGAAGACAGCCTTGATCCTGTCATCGGACGGAGCAA
AGAGATTCAGCGCGTCATTGAAGTTCTGAGCCGTAGAACGAAAAACAACCCTGTATTAATCGGGGAGCCAGGCGTAGGAA
AAACGGCGATAGCTGAGGGCTTGGCCCAGCAGATTATCAATAATGAAGTACCTGAAATCTTGCGCGACAAGCGGGTTATG
ACGCTTGATATGGGAACTGTCGTCGCAGGTACAAAATACCGCGGGGAGTTTGAAGACCGCCTTAAAAAAGTGATGGATGA
AATCCGCCAGGCGGGAAACATCATCCTGTTTATCGATGAACTTCATACATTAATCGGCGCCGGCGGCGCTGAAGGCGCAA
TCGACGCGTCCAATATTCTGAAACCGTCTCTTGCGCGCGGAGAGCTGCAATGTATCGGGGCCACAACTCTAGACGAATAT
CGTAAATACATTGAAAAAGACGCGGCCCTCGAACGGCGCTTCCAGCCGATTCAGGTTGATCAGCCTTCACCAGAGGAAAG
CATTCAGATTTTGAAAGGCTTGCGTGACCGCTATGAAGCCCATCACCGTGTATCCATTACAGATGAAGCGATCGAAGCGG
CCGTGAAGCTGTCAGACCGTTATATTTCTGACCGTTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAAGCCGGTTCA
AAGGTTCGTCTGCGTTCATTTACAACGCCTCCTAACCTGAAAGAGCTTGAACAAAAACTCGATGAAGTCCGCAAAGAAAA
AGATGCCGCAGTTCAAAGCCAGGAATTTGAAAAAGCAGCGTCTTTGCGTGACACAGAACAGCGTTTGCGCGAACAGGTAG
AGGAAACGAAGAAAACGTGGAAAGAAAAGCAAGGACAAGAAAACTCCGAAGTGACAGTCGATGATATTGCGATGGTCGTA
TCCAGCTGGACCGGAGTGCCGGTTTCAAAAATCGCCCAGACTGAAACAGATAAGCTGCTGAATATGGAAAGCATTCTTCA
TTCACGTGTTATCGGTCAGGATGAAGCGGTTGTCGCCGTTGCGAAAGCTGTAAGGCGCGCTCGTGCGGGTCTAAAAGATC
CGAAGCGTCCGATCGGTTCGTTTATCTTCCTTGGTCCGACAGGTGTAGGTAAGACTGAGCTTGCCCGCGCTCTTGCCGAA
TCGATTTTCGGCGATGAGGAAGCGATGATTCGCATCGATATGTCAGAGTATATGGAGAAGCATTCAACATCACGGCTCGT
CGGTTCTCCTCCGGGATATGTCGGCTATGATGAGGGCGGACAGCTTACTGAAAAAGTAAGAAGAAAACCTTATTCTGTCG
TCCTGCTCGATGAAATTGAAAAAGCCCACCCCGACGTCTTCAATATTCTGCTGCAAGTGCTTGAAGACGGCCGTTTGACC
GATTCAAAAGGACGTACAGTCGACTTTAGAAATACGATCCTGATTATGACGTCAAACGTCGGCGCAAGCGAACTGAGAAG
AAATAAATACGTCGGATTTAACGTACAGGACGAAACGCAGAACTACAAAGATATGAAAGACAAGGTCATGGGCGAATTAA
AACGCGCCTTCAGACCGGAATTCATCAACCGGATTGATGAAATCATCGTTTTCCACTCCTTGGAGAAAAAACATTTGAAA
GACATCGTCTCCCTCATGTCAGACCAATTGACAAAGCGTCTGAAAGAACAGGATCTTTCAATTGAACTGACAGAAGCGGC
CAAAGAAAAAATCGCCGAAGAAGGGGTAGACCTTGAATACGGGGCCCGTCCGCTCAGAAGGGCCATCCAAAAGCATGTCG
AAGACCGGCTGTCTGAAGAGCTCTTGAAGGGCAACATTACAAAAGGACAGCACATCGTGCTCGATGTGGAAAACGGAGAG
TTTGTCGTAAAAACCGAAGCGAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCCCTTGCCCAGGAAGAGGCTCTGCGTCTCGGGCATAA
TAATATTGGAACTGAACATATCCTGCTGGGCCTTGTCCGCGAAGGTGAAGGAATCGCGGCAAAAGCGCTGCAGGCGCTGG
GGCTGAGCCCTGATAAAATTCAAAAAGAGGTAGAAAGCCTGATTGGCCGGGGGCAGGAAATGTCCCAGTCGATCCACTAC
ACACCTAGGGCGAAAAAAGTAACAGAACTAGCGATGGATGAAGCGAGAAAGCTCGGCCATTCATATGTCGGAACCGAGCA
CATCCTCCTGGGATTAATACGTGAAGGCGAAGGCGTCGCTGCCAGAGTGCTGAATAATCTGGGCGTCAGCTTAAATAAAG
CAAGACAACAGGTGCTGCAGCTTTTGGGCAGCAATGAAAGCGGAGGAGGCGCCTCAGGTGCTAACAGCAATGCCAACACA
CCTACTTTGGACAGTCTCGCACGTGATTTAACCGCTATTGCTAAAGAAGACAGCCTTGATCCTGTCATCGGACGGAGCAA
AGAGATTCAGCGCGTCATTGAAGTTCTGAGCCGTAGAACGAAAAACAACCCTGTATTAATCGGGGAGCCAGGCGTAGGAA
AAACGGCGATAGCTGAGGGCTTGGCCCAGCAGATTATCAATAATGAAGTACCTGAAATCTTGCGCGACAAGCGGGTTATG
ACGCTTGATATGGGAACTGTCGTCGCAGGTACAAAATACCGCGGGGAGTTTGAAGACCGCCTTAAAAAAGTGATGGATGA
AATCCGCCAGGCGGGAAACATCATCCTGTTTATCGATGAACTTCATACATTAATCGGCGCCGGCGGCGCTGAAGGCGCAA
TCGACGCGTCCAATATTCTGAAACCGTCTCTTGCGCGCGGAGAGCTGCAATGTATCGGGGCCACAACTCTAGACGAATAT
CGTAAATACATTGAAAAAGACGCGGCCCTCGAACGGCGCTTCCAGCCGATTCAGGTTGATCAGCCTTCACCAGAGGAAAG
CATTCAGATTTTGAAAGGCTTGCGTGACCGCTATGAAGCCCATCACCGTGTATCCATTACAGATGAAGCGATCGAAGCGG
CCGTGAAGCTGTCAGACCGTTATATTTCTGACCGTTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAAGCCGGTTCA
AAGGTTCGTCTGCGTTCATTTACAACGCCTCCTAACCTGAAAGAGCTTGAACAAAAACTCGATGAAGTCCGCAAAGAAAA
AGATGCCGCAGTTCAAAGCCAGGAATTTGAAAAAGCAGCGTCTTTGCGTGACACAGAACAGCGTTTGCGCGAACAGGTAG
AGGAAACGAAGAAAACGTGGAAAGAAAAGCAAGGACAAGAAAACTCCGAAGTGACAGTCGATGATATTGCGATGGTCGTA
TCCAGCTGGACCGGAGTGCCGGTTTCAAAAATCGCCCAGACTGAAACAGATAAGCTGCTGAATATGGAAAGCATTCTTCA
TTCACGTGTTATCGGTCAGGATGAAGCGGTTGTCGCCGTTGCGAAAGCTGTAAGGCGCGCTCGTGCGGGTCTAAAAGATC
CGAAGCGTCCGATCGGTTCGTTTATCTTCCTTGGTCCGACAGGTGTAGGTAAGACTGAGCTTGCCCGCGCTCTTGCCGAA
TCGATTTTCGGCGATGAGGAAGCGATGATTCGCATCGATATGTCAGAGTATATGGAGAAGCATTCAACATCACGGCTCGT
CGGTTCTCCTCCGGGATATGTCGGCTATGATGAGGGCGGACAGCTTACTGAAAAAGTAAGAAGAAAACCTTATTCTGTCG
TCCTGCTCGATGAAATTGAAAAAGCCCACCCCGACGTCTTCAATATTCTGCTGCAAGTGCTTGAAGACGGCCGTTTGACC
GATTCAAAAGGACGTACAGTCGACTTTAGAAATACGATCCTGATTATGACGTCAAACGTCGGCGCAAGCGAACTGAGAAG
AAATAAATACGTCGGATTTAACGTACAGGACGAAACGCAGAACTACAAAGATATGAAAGACAAGGTCATGGGCGAATTAA
AACGCGCCTTCAGACCGGAATTCATCAACCGGATTGATGAAATCATCGTTTTCCACTCCTTGGAGAAAAAACATTTGAAA
GACATCGTCTCCCTCATGTCAGACCAATTGACAAAGCGTCTGAAAGAACAGGATCTTTCAATTGAACTGACAGAAGCGGC
CAAAGAAAAAATCGCCGAAGAAGGGGTAGACCTTGAATACGGGGCCCGTCCGCTCAGAAGGGCCATCCAAAAGCATGTCG
AAGACCGGCTGTCTGAAGAGCTCTTGAAGGGCAACATTACAAAAGGACAGCACATCGTGCTCGATGTGGAAAACGGAGAG
TTTGTCGTAAAAACCGAAGCGAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.296 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.124 |
99.506 |
0.499 |
| clpC | Streptococcus thermophilus LMG 18311 |
47.087 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.966 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.728 |
100 |
0.452 |
| clpE | Streptococcus mutans UA159 |
53.467 |
80.123 |
0.428 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.276 |
78.642 |
0.411 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae Rx1 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae D39 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae R6 |
53.291 |
76.914 |
0.41 |