Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CDO84_RS20855 | Genome accession | NZ_CP021911 |
| Coordinates | 4091891..4094323 (+) | Length | 810 a.a. |
| NCBI ID | WP_014475592.1 | Uniprot ID | A0A0G2YVK2 |
| Organism | Bacillus sp. MD-5 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4086891..4099323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO84_RS20840 (CDO84_20840) | ctsR | 4089768..4090232 (+) | 465 | WP_014662512.1 | transcriptional regulator CtsR | - |
| CDO84_RS20845 (CDO84_20845) | mcsA | 4090246..4090803 (+) | 558 | WP_014475591.1 | protein-arginine kinase activator protein McsA | - |
| CDO84_RS20850 (CDO84_20850) | - | 4090803..4091894 (+) | 1092 | WP_040081043.1 | protein arginine kinase | - |
| CDO84_RS20855 (CDO84_20855) | clpC | 4091891..4094323 (+) | 2433 | WP_014475592.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| CDO84_RS20860 (CDO84_20860) | radA | 4094415..4095791 (+) | 1377 | WP_015252992.1 | DNA repair protein RadA | Machinery gene |
| CDO84_RS20865 (CDO84_20865) | disA | 4095795..4096877 (+) | 1083 | WP_014662516.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| CDO84_RS20870 (CDO84_20870) | - | 4096993..4098093 (+) | 1101 | WP_014662517.1 | PIN/TRAM domain-containing protein | - |
| CDO84_RS20875 (CDO84_20875) | ispD | 4098108..4098806 (+) | 699 | WP_040081040.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| CDO84_RS20880 (CDO84_20880) | ispF | 4098799..4099275 (+) | 477 | WP_014475594.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90104.58 Da Isoelectric Point: 6.0253
>NTDB_id=234843 CDO84_RS20855 WP_014475592.1 4091891..4094323(+) (clpC) [Bacillus sp. MD-5]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=234843 CDO84_RS20855 WP_014475592.1 4091891..4094323(+) (clpC) [Bacillus sp. MD-5]
ATGATGTTTGGAAGATTTACAGAACGGGCTCAAAAGGTACTGGCGCTAGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAATATTGGCACTGAGCATATTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCCAAAGCTCTTCAAGCGCTTG
GACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTTGATCGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTAT
ACTCCTAGAGCTAAAAAAGTCATTGAACTTTCGATGGATGAAGCAAGAAAACTCGGTCATTCTTATGTCGGAACAGAACA
TATTCTTCTTGGCCTGATTCGTGAAGGAGAAGGTGTTGCCGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGATAGCTTGGCAAGAGACTTGACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGCAA
GGAAATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTTGGTA
AAACGGCTATCGCAGAAGGGCTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATCTTACGTGATAAACGTGTGATG
ACATTAGACATGGGAACGGTTGTTGCCGGCACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAAAAGGTCATGGATGA
AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACATTAATCGGGGCAGGCGGAGCAGAAGGTGCAA
TCGATGCATCTAATATCTTAAAACCTTCACTTGCTCGCGGTGAGCTCCAATGTATTGGAGCAACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGACGCAGCACTGGAACGCCGTTTTCAGCCGATCCAAGTTGATCAGCCATCTGTCGATGAAAG
TATTCAAATTTTACAAGGTCTTCGTGATAGATACGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCCATTGACTTAATCGATGAAGCTGGTTCC
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTCAATATGGAAAACATTCTTCA
CTCTCGTGTCATCGGCCAGGATGAAGCGGTTGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGGTTAAAAGATC
CTAAACGCCCAATTGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTTGGCGATGAAGAATCCATGATCAGAATAGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTGGGATACGATGAAGGCGGTCAATTGACTGAGAAAGTCAGAAGAAAACCTTACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGCCGATTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTTTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACTCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGGGCGTTTAGACCTGAGTTCATCAACCGTATTGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATCGTGTCATTAATGTCTGATCAATTGACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACTGATGCTGC
AAAAGCAAAAGTCGCGGAAGAGGGCGTTGATCTGGAGTACGGAGCCCGTCCGTTAAGAAGAGCGATCCAAAAACACGTAG
AGGATCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGTGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGGGCTCAAAAGGTACTGGCGCTAGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAATATTGGCACTGAGCATATTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCCAAAGCTCTTCAAGCGCTTG
GACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTTGATCGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTAT
ACTCCTAGAGCTAAAAAAGTCATTGAACTTTCGATGGATGAAGCAAGAAAACTCGGTCATTCTTATGTCGGAACAGAACA
TATTCTTCTTGGCCTGATTCGTGAAGGAGAAGGTGTTGCCGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGATAGCTTGGCAAGAGACTTGACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGCAA
GGAAATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTTGGTA
AAACGGCTATCGCAGAAGGGCTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATCTTACGTGATAAACGTGTGATG
ACATTAGACATGGGAACGGTTGTTGCCGGCACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAAAAGGTCATGGATGA
AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACATTAATCGGGGCAGGCGGAGCAGAAGGTGCAA
TCGATGCATCTAATATCTTAAAACCTTCACTTGCTCGCGGTGAGCTCCAATGTATTGGAGCAACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGACGCAGCACTGGAACGCCGTTTTCAGCCGATCCAAGTTGATCAGCCATCTGTCGATGAAAG
TATTCAAATTTTACAAGGTCTTCGTGATAGATACGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCCATTGACTTAATCGATGAAGCTGGTTCC
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTCAATATGGAAAACATTCTTCA
CTCTCGTGTCATCGGCCAGGATGAAGCGGTTGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGGTTAAAAGATC
CTAAACGCCCAATTGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTTGGCGATGAAGAATCCATGATCAGAATAGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTGGGATACGATGAAGGCGGTCAATTGACTGAGAAAGTCAGAAGAAAACCTTACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGCCGATTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTTTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACTCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGGGCGTTTAGACCTGAGTTCATCAACCGTATTGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATCGTGTCATTAATGTCTGATCAATTGACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACTGATGCTGC
AAAAGCAAAAGTCGCGGAAGAGGGCGTTGATCTGGAGTACGGAGCCCGTCCGTTAAGAAGAGCGATCCAAAAACACGTAG
AGGATCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGTGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.877 |
100 |
0.999 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.499 |
99.012 |
0.5 |
| clpC | Streptococcus thermophilus LMD-9 |
46.481 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.238 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.664 |
87.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.388 |
80.123 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae D39 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae R6 |
53.772 |
76.914 |
0.414 |