Detailed information NTG0234810

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: CDO84_RS11835
• Genome accession: NZ_CP021911
• Coordinates: 2365067..2367397 (-)
• Length: 776 a.a.
• NCBI ID: WP_040082574.1
• Uniprot ID: -
• Organism: Bacillus sp. MD-5
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2360067..2372397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDO84_RS11805 (CDO84_11805)	-	2360405..2360743 (-)	339	WP_040082578.1	YqxA family protein	-
CDO84_RS11810 (CDO84_11810)	spoIIP	2360760..2361965 (-)	1206	WP_040082576.1	spore autolysin SpoIIP	-
CDO84_RS11815 (CDO84_11815)	gpr	2362028..2363134 (-)	1107	WP_040082575.1	GPR endopeptidase	-
CDO84_RS11820 (CDO84_11820)	rpsT	2363338..2363604 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
CDO84_RS11825 (CDO84_11825)	holA	2363619..2364662 (-)	1044	WP_014664666.1	DNA polymerase III subunit delta	-
CDO84_RS21405	-	2364702..2364815 (-)	114	WP_134975484.1	hypothetical protein	-
CDO84_RS11830 (CDO84_11830)	-	2364892..2365026 (+)	135	WP_003229983.1	YqzM family protein	-
CDO84_RS11835 (CDO84_11835)	comEC	2365067..2367397 (-)	2331	WP_040082574.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CDO84_RS11840 (CDO84_11840)	-	2367401..2367970 (-)	570	WP_014664668.1	ComE operon protein 2	-
CDO84_RS11845 (CDO84_11845)	comEA	2368037..2368654 (-)	618	WP_014664669.1	helix-hairpin-helix domain-containing protein	Machinery gene
CDO84_RS11850 (CDO84_11850)	comER	2368738..2369559 (+)	822	WP_004398597.1	late competence protein ComER	-
CDO84_RS11855 (CDO84_11855)	-	2369625..2370368 (-)	744	WP_014664670.1	class I SAM-dependent methyltransferase	-
CDO84_RS11860 (CDO84_11860)	rsfS	2370365..2370721 (-)	357	WP_014664671.1	ribosome silencing factor	-
CDO84_RS11865 (CDO84_11865)	yqeK	2370739..2371299 (-)	561	WP_014664672.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
CDO84_RS11870 (CDO84_11870)	-	2371289..2371858 (-)	570	WP_014664673.1	nicotinate-nucleotide adenylyltransferase	-
CDO84_RS11875 (CDO84_11875)	yhbY	2371870..2372160 (-)	291	WP_014664674.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86673.24 Da
• Isoelectric Point: 7.6657

>NTDB_id=234810 CDO84_RS11835 WP_040082574.1 2365067..2367397(-) (comEC) [Bacillus sp. MD-5]
MRNSRLLLPLAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYHF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSADEKEKLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCGEPENFKYKVPSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFFIMIRVGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVRSATAICLSYITLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLAIVSLIAQLGSLPILLYHFHQFSIISIPMNMLLVPFYTFCILPGA
VAGVLLLSLSSSFGRLFFSWFDFLISWTNKLITKIADIDVFTLIIARPVPVLLFLFTVTIILLLMSIEKRSFSQLMITSG
ICCSVLFLLFASPRLSPEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
INQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAKEEGVAIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMEMGGMSWILTGDLEKEGEQEVMKVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGKN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYQNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=234810 CDO84_RS11835 WP_040082574.1 2365067..2367397(-) (comEC) [Bacillus sp. MD-5]
ATGCGTAATTCGCGTTTGTTATTGCCTTTGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTATTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTCATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCATTTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGATGAAAAAGAAAAGCTGTTATACATAGAACCAGGAATGTCATGTGAATTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAATGAGTATCTTTATCGACAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCGGCGAACCTGAAAATTTCAAGTATAAGGTGCCCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATTTCAGGGCTCCACGTT
GGGATTTTGACAGCGGGTTTGTTTTTTATCATGATCCGTGTCGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTTTAATGTCAGGTGTTTACTTAG
CTGGAAGTCTCGTCAAATGGCGTGTCCGCTCGGCAACGGCAATCTGTCTTTCATATATCACCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCTGTCAGTTTTTCTTTAATTCTTTCCTCTTCTATTTTTCAGCA
GGTAAAAACCTCCTTGGGTCAGCTGGCAATTGTATCACTCATCGCCCAGCTCGGATCGCTTCCGATTCTCCTGTATCATT
TTCATCAGTTTTCAATCATCAGCATACCGATGAATATGCTGTTGGTTCCATTTTATACGTTCTGTATTTTGCCGGGGGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCTCTTCATTTGGCAGATTGTTTTTCAGTTGGTTTGATTTCTTGATAAGCTG
GACCAATAAGCTGATCACAAAAATCGCAGATATTGATGTGTTCACGCTTATCATCGCACGTCCCGTGCCTGTTCTTCTCT
TTTTATTCACAGTGACGATCATCCTATTGCTTATGTCGATTGAAAAACGCTCCTTTTCTCAGTTGATGATAACCAGCGGC
ATTTGCTGCTCGGTGCTGTTTCTTCTCTTTGCATCTCCGCGTCTTAGTCCCGAAGGAGAAGTGGATATGATTGATATTGG
GCAGGGCGACAGCATGTATGTAGGTGCTCCGCATCAGCGGGGACATGTCTTAATCGATACTGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAACATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAACCAGCTTGATGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACCTTGCTGAAGCACCA
CAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAAAAAGTGCTGCAGGCAGCTAAAGAAG
AGGGAGTGGCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
GCGCCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTATGGATGGAAATGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAAGGTGTTTCCGAATATAAAAGCAGATGTGTTAAAGGTGGGGCATC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTATCACCATCCTCATCAAGAAGTTCTGCAGATATTACAGAGACATTCTATCCGTGTGCTGCGTACAGATCAAAA
CGGAACGATCCAATATAGATATCAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	94.201	100	0.942