Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   CD007_RS15980 Genome accession   NZ_CP021903
Coordinates   3085076..3087376 (-) Length   766 a.a.
NCBI ID   WP_088300729.1    Uniprot ID   -
Organism   Bacillus subtilis strain ge28     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3080076..3092376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD007_RS15940 (CD007_15940) mrpB 3080543..3080974 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  CD007_RS15945 (CD007_15945) mrpC 3080974..3081315 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  CD007_RS15950 (CD007_15950) mrpD 3081308..3082789 (+) 1482 WP_043940184.1 Na+/H+ antiporter subunit D -
  CD007_RS15955 (CD007_15955) mrpE 3082795..3083271 (+) 477 WP_029318490.1 Na+/H+ antiporter subunit E -
  CD007_RS15960 (CD007_15960) mrpF 3083271..3083555 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  CD007_RS15965 (CD007_15965) mnhG 3083539..3083913 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  CD007_RS15970 (CD007_15970) yuxO 3083952..3084332 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  CD007_RS15975 (CD007_15975) comA 3084351..3084995 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  CD007_RS15980 (CD007_15980) comP 3085076..3087376 (-) 2301 WP_088300729.1 histidine kinase Regulator
  CD007_RS15985 (CD007_15985) pdeH 3087454..3088011 (-) 558 Protein_3091 cyclic di-GMP phosphodiesterase -
  CD007_RS15990 (CD007_15990) pncB 3088148..3089620 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  CD007_RS15995 (CD007_15995) pncA 3089636..3090187 (-) 552 WP_043940186.1 isochorismatase family cysteine hydrolase -
  CD007_RS16000 (CD007_16000) yueI 3090284..3090682 (-) 399 WP_032726794.1 YueI family protein -
  CD007_RS16005 (CD007_16005) yueH 3090754..3091002 (-) 249 WP_041850583.1 YueH family protein -
  CD007_RS16010 (CD007_16010) yueG 3091075..3091296 (-) 222 WP_014477839.1 spore germination protein -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88544.65 Da        Isoelectric Point: 7.6650

>NTDB_id=234637 CD007_RS15980 WP_088300729.1 3085076..3087376(-) (comP) [Bacillus subtilis strain ge28]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYEKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=234637 CD007_RS15980 WP_088300729.1 3085076..3087376(-) (comP) [Bacillus subtilis strain ge28]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCTGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCTATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACTTCTGTAATGTTTAATTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTAGGCACTGTGTTATTCAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGTTGATTAGAGATTCAACTTCTTTGACCCAAGTATTTGAGGAACTGAAAACCACGAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.653

100

0.59


Multiple sequence alignment