Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   S100333_RS02180 Genome accession   NZ_CP021892
Coordinates   427527..428477 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis strain SRCM100333     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 422527..433477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100333_RS02155 (S100333_00441) rapC 423981..425129 (+) 1149 WP_088272168.1 response regulator aspartate phosphatase RapC Regulator
  S100333_RS02160 (S100333_00442) phrC 425113..425235 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  S100333_RS02165 (S100333_00443) yczM 425335..425424 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  S100333_RS02170 (S100333_00444) yczN 425506..425619 (-) 114 WP_032728921.1 YjcZ family sporulation protein -
  S100333_RS02175 (S100333_00445) thrD 425772..427136 (-) 1365 WP_021481755.1 aspartate kinase -
  S100333_RS02180 (S100333_00447) ceuB 427527..428477 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  S100333_RS02185 (S100333_00448) yclO 428470..429417 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  S100333_RS02190 (S100333_00449) yclP 429411..430169 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  S100333_RS02195 (S100333_00450) yclQ 430191..431144 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  S100333_RS22685 (S100333_00451) - 431374..431796 (+) 423 WP_250615391.1 hypothetical protein -
  S100333_RS22690 (S100333_00452) - 431898..432305 (+) 408 WP_250615392.1 hypothetical protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=234507 S100333_RS02180 WP_014475804.1 427527..428477(+) (ceuB) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=234507 S100333_RS02180 WP_014475804.1 427527..428477(+) (ceuB) [Bacillus subtilis subsp. subtilis strain SRCM100333]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains


Predicted by InterproScan.

(9-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525


Multiple sequence alignment