Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BB162_RS03965 Genome accession   NZ_CP021869
Coordinates   705398..706207 (+) Length   269 a.a.
NCBI ID   WP_001289498.1    Uniprot ID   X5KFV3
Organism   Streptococcus agalactiae strain SG-M6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 700398..711207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB162_RS03940 (BB162_03940) - 700727..701422 (-) 696 WP_000173638.1 amino acid ABC transporter permease -
  BB162_RS03945 (BB162_03945) - 701435..702235 (-) 801 WP_000946173.1 transporter substrate-binding domain-containing protein -
  BB162_RS03950 (BB162_03950) - 702247..703002 (-) 756 WP_000053146.1 amino acid ABC transporter ATP-binding protein -
  BB162_RS03955 (BB162_03955) vicR 703342..704052 (+) 711 WP_000722052.1 response regulator YycF Regulator
  BB162_RS03960 (BB162_03960) vicK 704045..705394 (+) 1350 WP_088197843.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BB162_RS03965 (BB162_03965) vicX 705398..706207 (+) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  BB162_RS03970 (BB162_03970) - 706210..706578 (+) 369 WP_000719384.1 YbaN family protein -
  BB162_RS03975 (BB162_03975) rnc 706753..707439 (+) 687 WP_000661526.1 ribonuclease III -
  BB162_RS03980 (BB162_03980) smc 707447..710986 (+) 3540 WP_000478786.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30273.24 Da        Isoelectric Point: 6.2265

>NTDB_id=234226 BB162_RS03965 WP_001289498.1 705398..706207(+) (vicX) [Streptococcus agalactiae strain SG-M6]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=234226 BB162_RS03965 WP_001289498.1 705398..706207(+) (vicX) [Streptococcus agalactiae strain SG-M6]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGACGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTTCTTGCAGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATACTAGTTACCCATGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCCAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCTTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCACCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5KFV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment