Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BB159_RS11095 Genome accession   NZ_CP021868
Coordinates   2146811..2147584 (+) Length   257 a.a.
NCBI ID   WP_000456084.1    Uniprot ID   A0AAD2WW20
Organism   Streptococcus agalactiae strain SG-M8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2141811..2152584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB159_RS11085 (BB159_11085) rlmH 2144804..2145283 (-) 480 WP_000768333.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BB159_RS11090 (BB159_11090) htrA 2145484..2146713 (+) 1230 WP_000728357.1 S1C family serine protease Regulator
  BB159_RS11095 (BB159_11095) spo0J 2146811..2147584 (+) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator
  BB159_RS11100 (BB159_11100) dnaA 2147793..2149154 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  BB159_RS11105 (BB159_11105) dnaN 2149309..2150445 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  BB159_RS11110 (BB159_11110) - 2150503..2151395 (+) 893 Protein_2091 diacylglycerol/lipid kinase family protein -
  BB159_RS11115 (BB159_11115) - 2151405..2151602 (+) 198 WP_000285199.1 DUF951 domain-containing protein -
  BB159_RS11120 (BB159_11120) - 2151769..2151921 (+) 153 WP_071659936.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29239.71 Da        Isoelectric Point: 9.8145

>NTDB_id=234200 BB159_RS11095 WP_000456084.1 2146811..2147584(+) (spo0J) [Streptococcus agalactiae strain SG-M8]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=234200 BB159_RS11095 WP_000456084.1 2146811..2147584(+) (spo0J) [Streptococcus agalactiae strain SG-M8]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTTGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment