Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   BB164_RS02475 Genome accession   NZ_CP021867
Coordinates   405392..406426 (+) Length   344 a.a.
NCBI ID   WP_000732713.1    Uniprot ID   A0AAV3JGP6
Organism   Streptococcus agalactiae strain SG-M25     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 400392..411426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB164_RS02435 (BB164_02435) tsaE 400468..400911 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BB164_RS02440 (BB164_02440) - 400904..401425 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  BB164_RS02445 (BB164_02445) brpA 401434..402741 (+) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  BB164_RS02450 (BB164_02450) - 402805..403101 (-) 297 WP_000690175.1 hypothetical protein -
  BB164_RS02455 (BB164_02455) - 403098..403517 (-) 420 WP_000368097.1 HIT family protein -
  BB164_RS02460 (BB164_02460) - 403853..404356 (+) 504 WP_000773453.1 hypothetical protein -
  BB164_RS02465 (BB164_02465) - 404408..404593 (-) 186 WP_000368100.1 hypothetical protein -
  BB164_RS02470 (BB164_02470) pptA 404665..405390 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  BB164_RS02475 (BB164_02475) pptB 405392..406426 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  BB164_RS02480 (BB164_02480) ccrZ 406484..407284 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  BB164_RS02485 (BB164_02485) trmB 407274..407909 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BB164_RS02495 (BB164_02495) - 408099..409169 (-) 1071 WP_000179394.1 site-specific integrase -
  BB164_RS02500 (BB164_02500) - 409314..409856 (-) 543 WP_001047048.1 PH domain-containing protein -
  BB164_RS02505 (BB164_02505) - 409881..410636 (-) 756 WP_088196747.1 LexA family transcriptional regulator -
  BB164_RS11820 - 410992..411150 (+) 159 WP_000871400.1 hypothetical protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40206.54 Da        Isoelectric Point: 10.4988

>NTDB_id=234118 BB164_RS02475 WP_000732713.1 405392..406426(+) (pptB) [Streptococcus agalactiae strain SG-M25]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=234118 BB164_RS02475 WP_000732713.1 405392..406426(+) (pptB) [Streptococcus agalactiae strain SG-M25]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485

  pptB Streptococcus salivarius strain HSISS4

48.256

100

0.483


Multiple sequence alignment