Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CDH81_RS07095 Genome accession   NZ_CP021772
Coordinates   1397484..1398257 (+) Length   257 a.a.
NCBI ID   WP_000456084.1    Uniprot ID   A0AAD2WW20
Organism   Streptococcus agalactiae strain B111     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1392484..1403257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH81_RS07085 (CDH81_07005) rlmH 1395477..1395956 (-) 480 WP_000768333.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CDH81_RS07090 (CDH81_07010) htrA 1396157..1397386 (+) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  CDH81_RS07095 (CDH81_07015) spo0J 1397484..1398257 (+) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator
  CDH81_RS07100 (CDH81_07020) dnaA 1398466..1399827 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  CDH81_RS07105 (CDH81_07025) dnaN 1399982..1401118 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  CDH81_RS07110 (CDH81_07030) - 1401176..1402068 (+) 893 Protein_1375 diacylglycerol kinase family protein -
  CDH81_RS07115 (CDH81_07035) - 1402078..1402275 (+) 198 WP_000285199.1 DUF951 family protein -
  CDH81_RS07120 (CDH81_07040) - 1402442..1402594 (+) 153 WP_071659936.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29239.71 Da        Isoelectric Point: 9.8145

>NTDB_id=233304 CDH81_RS07095 WP_000456084.1 1397484..1398257(+) (spo0J) [Streptococcus agalactiae strain B111]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=233304 CDH81_RS07095 WP_000456084.1 1397484..1398257(+) (spo0J) [Streptococcus agalactiae strain B111]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTTGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment