Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CDH83_RS10035 Genome accession   NZ_CP021770
Coordinates   1966747..1967520 (+) Length   257 a.a.
NCBI ID   WP_000456087.1    Uniprot ID   A0AAW3HS18
Organism   Streptococcus agalactiae strain B508     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1961747..1972520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH83_RS10025 (CDH83_09955) rlmH 1964740..1965219 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CDH83_RS10030 (CDH83_09960) htrA 1965420..1966649 (+) 1230 WP_000728358.1 trypsin-like peptidase domain-containing protein Regulator
  CDH83_RS10035 (CDH83_09965) spo0J 1966747..1967520 (+) 774 WP_000456087.1 ParB/RepB/Spo0J family partition protein Regulator
  CDH83_RS10040 (CDH83_09970) dnaA 1967719..1969079 (+) 1361 Protein_1894 chromosomal replication initiator protein DnaA -
  CDH83_RS10045 (CDH83_09975) dnaN 1969234..1970370 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  CDH83_RS10050 (CDH83_09980) - 1970428..1971321 (+) 894 WP_000987446.1 diacylglycerol kinase family protein -
  CDH83_RS10055 (CDH83_09985) - 1971331..1971528 (+) 198 WP_000285199.1 DUF951 family protein -
  CDH83_RS10060 (CDH83_09990) - 1971730..1971933 (+) 204 WP_000369332.1 hypothetical protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29238.73 Da        Isoelectric Point: 9.9193

>NTDB_id=233214 CDH83_RS10035 WP_000456087.1 1966747..1967520(+) (spo0J) [Streptococcus agalactiae strain B508]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=233214 CDH83_RS10035 WP_000456087.1 1966747..1967520(+) (spo0J) [Streptococcus agalactiae strain B508]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGCCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment