Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   CDH85_RS04165 Genome accession   NZ_CP021769
Coordinates   734811..736070 (+) Length   419 a.a.
NCBI ID   WP_000900651.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain B509     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 729811..741070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH85_RS04135 (CDH85_04115) - 730937..732100 (+) 1164 WP_001293700.1 NADP-dependent malic enzyme -
  CDH85_RS04145 (CDH85_04125) - 732291..732635 (+) 345 WP_000286789.1 thioredoxin domain-containing protein -
  CDH85_RS04150 (CDH85_04130) yajC 732712..733053 (+) 342 WP_000056607.1 preprotein translocase subunit YajC -
  CDH85_RS04155 (CDH85_04135) - 733219..733971 (+) 753 WP_112435763.1 isoprenyl transferase -
  CDH85_RS04160 (CDH85_04140) - 733986..734780 (+) 795 WP_000664683.1 phosphatidate cytidylyltransferase -
  CDH85_RS04165 (CDH85_04145) eeP 734811..736070 (+) 1260 WP_000900651.1 RIP metalloprotease RseP Regulator
  CDH85_RS04170 (CDH85_04150) - 736162..738015 (+) 1854 WP_000814043.1 proline--tRNA ligase -
  CDH85_RS04175 (CDH85_04155) - 738140..738724 (+) 585 WP_000842266.1 glycoside hydrolase family 73 protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46030.99 Da        Isoelectric Point: 9.9616

>NTDB_id=233150 CDH85_RS04165 WP_000900651.1 734811..736070(+) (eeP) [Streptococcus agalactiae strain B509]
MLGILTFIIIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEIRIAPLDVQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTSHLEKNQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGFKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYITLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=233150 CDH85_RS04165 WP_000900651.1 734811..736070(+) (eeP) [Streptococcus agalactiae strain B509]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATTTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAGCCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATCAATGTAACAGCTTATGATTTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTATAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAATTCGTATTGCTCCCTTAGATGTGCAGTAT
CAGAATGCTTCTGTATGGGGGCGCTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGAGGTGTTCAAGATTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCTG
CTAGTGCAGGTTTAAAAAATAATGACCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGTCATTTAGAAAAAAACCAAAAACTTGCCCTTAAAATTAAGAGCAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTCTAAAGACAAGCTTTAAAGACA
AGCTTTTAGGTGGATTTAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCAGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCCATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTACGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTAACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(205-271)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.524

100

0.697

  eeP Streptococcus thermophilus LMD-9

69.286

100

0.695


Multiple sequence alignment