Detailed information NTG0232489

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: S100027_RS19640
• Genome accession: NZ_CP021677
• Coordinates: 3729323..3730057 (-)
• Length: 244 a.a.
• NCBI ID: WP_011198352.1
• Uniprot ID: A0A415J866
• Organism: Bacillus licheniformis strain SRCM100027
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3724323..3735057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100027_RS19605 (S100027_03941)	fliW	3724474..3724905 (-)	432	WP_011198351.1	flagellar assembly protein FliW	-
S100027_RS19610 (S100027_03942)	-	3724927..3725493 (-)	567	WP_071583860.1	DUF6470 family protein	-
S100027_RS19615 (S100027_03943)	flgL	3725543..3726454 (-)	912	WP_071583859.1	flagellar hook-associated protein FlgL	-
S100027_RS19620 (S100027_03944)	flgK	3726465..3727988 (-)	1524	WP_071583858.1	flagellar hook-associated protein FlgK	-
S100027_RS19625 (S100027_03945)	-	3728004..3728480 (-)	477	WP_003185711.1	flagellar protein FlgN	-
S100027_RS19630 (S100027_03946)	flgM	3728499..3728765 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
S100027_RS19635 (S100027_03947)	-	3728845..3729264 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
S100027_RS19640	comFC	3729323..3730057 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
S100027_RS19645 (S100027_03948)	-	3730014..3730298 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
S100027_RS19650 (S100027_03949)	comFA	3730353..3731747 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
S100027_RS19655 (S100027_03950)	-	3731868..3732710 (-)	843	WP_003185726.1	DegV family protein	-
S100027_RS19660 (S100027_03951)	degU	3732830..3733519 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
S100027_RS19665 (S100027_03952)	degS	3733601..3734758 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27811.22 Da
• Isoelectric Point: 9.4827

>NTDB_id=232489 S100027_RS19640 WP_011198352.1 3729323..3730057(-) (comFC) [Bacillus licheniformis strain SRCM100027]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=232489 S100027_RS19640 WP_011198352.1 3729323..3730057(-) (comFC) [Bacillus licheniformis strain SRCM100027]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (151-242)

• Double zinc ribbon domain (DZR_2) (17-76)

3D structure

• AlphaFold DB: A0A415J866

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.321	97.131	0.508