Detailed information    

insolico Bioinformatically predicted

Overview

Name   MMJJ_RS05685   Type   Machinery gene
Locus tag   MMP_RS02790 Genome accession   NC_005791
Coordinates   532987..533208 (-) Length   73 a.a.
NCBI ID   WP_011170472.1    Uniprot ID   Q6LZU5
Organism   Methanococcus maripaludis S2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 527987..538208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMP_RS02765 (MMP0523) - 529146..529850 (-) 705 WP_011170467.1 ABC transporter ATP-binding protein -
  MMP_RS02770 (MMP0524) - 530045..530620 (-) 576 WP_048064058.1 hypothetical protein -
  MMP_RS02775 (MMP0525) - 530661..531122 (-) 462 WP_011170469.1 hypothetical protein -
  MMP_RS02780 (MMP0526) - 531626..532351 (+) 726 WP_011170470.1 hypothetical protein -
  MMP_RS02785 (MMP0527) - 532365..532985 (+) 621 WP_011170471.1 helix-turn-helix transcriptional regulator -
  MMP_RS02790 (MMP0528) MMJJ_RS05685 532987..533208 (-) 222 WP_011170472.1 class III signal peptide-containing protein Machinery gene
  MMP_RS02795 (MMP0529) - 533633..535291 (-) 1659 WP_011170473.1 SulP family inorganic anion transporter -
  MMP_RS02800 (MMP0530) - 535522..536139 (+) 618 WP_011170474.1 nucleotidyltransferase domain-containing protein -
  MMP_RS02805 (MMP0531) - 536126..536635 (+) 510 WP_011170475.1 HEPN domain-containing protein -

Sequence

Protein


Download         Length: 73 a.a.        Molecular weight: 7740.94 Da        Isoelectric Point: 7.9903

>NTDB_id=23232 MMP_RS02790 WP_011170472.1 532987..533208(-) (MMJJ_RS05685) [Methanococcus maripaludis S2]
MLKKLYSKKGQVSMEMGILVASAVAVAAIASYFYAVNVKYSDTHAGETAKNTSNALINVTENVCGNISEITIP

Nucleotide


Download         Length: 222 bp        

>NTDB_id=23232 MMP_RS02790 WP_011170472.1 532987..533208(-) (MMJJ_RS05685) [Methanococcus maripaludis S2]
ATGCTTAAAAAATTATATTCAAAAAAAGGACAAGTTTCAATGGAAATGGGAATCTTGGTTGCGTCCGCAGTTGCGGTTGC
AGCAATTGCAAGCTATTTTTATGCAGTAAACGTTAAATATTCAGATACCCATGCTGGTGAAACTGCAAAAAATACGAGTA
ATGCCCTTATAAACGTTACAGAAAATGTTTGTGGCAATATTTCTGAAATAACTATTCCCTAA

Domains

Predicted by InterproScan.

Class III signal peptide (Class_IIIsignal)

(8-34)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6LZU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  MMJJ_RS05685 Methanococcus maripaludis strain DSM 2067

56.944

98.63

0.562
  epdE Methanococcus maripaludis strain DSM 2067

46.269

91.781

0.425

Multiple sequence alignment