Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CCX85_RS02310 Genome accession   NZ_CP021640
Coordinates   429646..430455 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain JS12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 424646..435455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCX85_RS02290 (CCX85_02300) - 425088..426335 (+) 1248 WP_002995606.1 AMP-binding protein -
  CCX85_RS02295 (CCX85_02305) - 426391..427425 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  CCX85_RS02300 (CCX85_02310) vicR 427587..428297 (+) 711 WP_002985645.1 response regulator YycF Regulator
  CCX85_RS02305 (CCX85_02315) vicK 428290..429642 (+) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CCX85_RS02310 (CCX85_02320) vicX 429646..430455 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  CCX85_RS02315 (CCX85_02325) rnc 430898..431590 (+) 693 WP_002990670.1 ribonuclease III -
  CCX85_RS02320 (CCX85_02330) smc 431591..435130 (+) 3540 WP_101248313.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=232105 CCX85_RS02310 WP_002985641.1 429646..430455(+) (vicX) [Streptococcus pyogenes strain JS12]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=232105 CCX85_RS02310 WP_002985641.1 429646..430455(+) (vicX) [Streptococcus pyogenes strain JS12]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment