Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | CCD82_RS03070 | Genome accession | NZ_CP021522 |
| Coordinates | 530581..531174 (+) | Length | 197 a.a. |
| NCBI ID | WP_002229321.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 06-178 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 525581..536174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD82_RS03040 (CCD82_03065) | - | 525876..526463 (-) | 588 | WP_002222659.1 | superoxide dismutase | - |
| CCD82_RS03050 (CCD82_03075) | dnaB | 526626..528032 (+) | 1407 | WP_002219448.1 | replicative DNA helicase | - |
| CCD82_RS03055 (CCD82_03080) | pilH | 528334..529002 (+) | 669 | WP_002259882.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CCD82_RS03060 (CCD82_03085) | pilV | 529032..529652 (+) | 621 | WP_002253554.1 | type IV pilus modification protein PilV | Machinery gene |
| CCD82_RS03065 (CCD82_03090) | pilJ | 529649..530602 (+) | 954 | WP_002259883.1 | PilW family protein | Machinery gene |
| CCD82_RS03070 (CCD82_03095) | pilK | 530581..531174 (+) | 594 | WP_002229321.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCD82_RS03075 (CCD82_03100) | pilX | 531179..531652 (+) | 474 | WP_002229319.1 | PilX family type IV pilin | Machinery gene |
| CCD82_RS03090 (CCD82_03115) | - | 533465..533893 (-) | 429 | Protein_528 | AzlC family ABC transporter permease | - |
| CCD82_RS03095 (CCD82_03120) | dut | 534035..534487 (+) | 453 | WP_002229326.1 | dUTP diphosphatase | - |
| CCD82_RS03100 (CCD82_03125) | dapC | 534564..535751 (+) | 1188 | WP_002259885.1 | succinyldiaminopimelate transaminase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21655.53 Da Isoelectric Point: 7.5809
>NTDB_id=231778 CCD82_RS03070 WP_002229321.1 530581..531174(+) (pilK) [Neisseria meningitidis strain 06-178]
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALSLAEAALREGELQVLDLEYDT
DSKVTFSENCGKGLCTAVNVRTNNDNEEAFDNIVVQGKPTVEAVKRSCPANSTNLCIDNKGTKYKKGTQSVSKMPRYIIE
YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALSLAEAALREGELQVLDLEYDT
DSKVTFSENCGKGLCTAVNVRTNNDNEEAFDNIVVQGKPTVEAVKRSCPANSTNLCIDNKGTKYKKGTQSVSKMPRYIIE
YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE
Nucleotide
Download Length: 594 bp
>NTDB_id=231778 CCD82_RS03070 WP_002229321.1 530581..531174(+) (pilK) [Neisseria meningitidis strain 06-178]
ATGCGCAAACAGAACACTTTGACGGGAATCCCGACTTCTGACGGACAGAGGGGGTTTGCACTGTTTATCGTGCTGATGGT
GATGATCGTCGTGGCTTTTTTGGTTGTAACTGCCGCGCAGTCTTACAATACCGAGCAGCGGATCAGTGCCAACGAATCAG
ACAGGAAATTGGCTTTGTCTTTGGCCGAGGCGGCTTTGCGGGAAGGCGAACTTCAGGTTTTGGATTTGGAATATGATACG
GACAGTAAGGTTACATTTAGCGAAAACTGTGGAAAAGGTCTGTGTACCGCAGTGAATGTGCGGACAAATAATGATAATGA
AGAGGCTTTTGACAATATCGTGGTGCAAGGCAAGCCCACCGTTGAGGCGGTGAAGCGTTCTTGCCCTGCAAATTCTACCA
ACCTGTGCATTGACAATAAAGGGACGAAATATAAGAAAGGCACGCAAAGCGTCAGCAAAATGCCACGTTATATTATCGAA
TATTTGGGCGTGAAGAACGGAGAAAATGTTTATCGGGTTACTGCCAAGGCTTGGGGTAAGAATGCCAATACCGTGGTCGT
CCTTCAATCTTATGTAAGCAATAATGATGAGTAA
ATGCGCAAACAGAACACTTTGACGGGAATCCCGACTTCTGACGGACAGAGGGGGTTTGCACTGTTTATCGTGCTGATGGT
GATGATCGTCGTGGCTTTTTTGGTTGTAACTGCCGCGCAGTCTTACAATACCGAGCAGCGGATCAGTGCCAACGAATCAG
ACAGGAAATTGGCTTTGTCTTTGGCCGAGGCGGCTTTGCGGGAAGGCGAACTTCAGGTTTTGGATTTGGAATATGATACG
GACAGTAAGGTTACATTTAGCGAAAACTGTGGAAAAGGTCTGTGTACCGCAGTGAATGTGCGGACAAATAATGATAATGA
AGAGGCTTTTGACAATATCGTGGTGCAAGGCAAGCCCACCGTTGAGGCGGTGAAGCGTTCTTGCCCTGCAAATTCTACCA
ACCTGTGCATTGACAATAAAGGGACGAAATATAAGAAAGGCACGCAAAGCGTCAGCAAAATGCCACGTTATATTATCGAA
TATTTGGGCGTGAAGAACGGAGAAAATGTTTATCGGGTTACTGCCAAGGCTTGGGGTAAGAATGCCAATACCGTGGTCGT
CCTTCAATCTTATGTAAGCAATAATGATGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
87.129 |
100 |
0.893 |