Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   C1N79_RS20425 Genome accession   NZ_CP027297
Coordinates   4544887..4546011 (-) Length   374 a.a.
NCBI ID   WP_029394644.1    Uniprot ID   A0ABW1Y1X0
Organism   Streptomyces sp. SGAir0924     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4539887..4551011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C1N79_RS36725 (C1N79_20410) - 4540477..4542549 (+) 2073 WP_302680141.1 sensor histidine kinase -
  C1N79_RS20405 (C1N79_20415) - 4542546..4543211 (+) 666 WP_046251959.1 response regulator transcription factor -
  C1N79_RS20410 (C1N79_20420) - 4543218..4543844 (-) 627 WP_031021930.1 phosphatase PAP2 family protein -
  C1N79_RS35965 - 4544020..4544865 (+) 846 WP_062130456.1 hypothetical protein -
  C1N79_RS20425 (C1N79_20435) disA 4544887..4546011 (-) 1125 WP_029394644.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C1N79_RS20430 (C1N79_20440) radA/sms 4546093..4547502 (-) 1410 WP_019331015.1 DNA repair protein RadA Machinery gene
  C1N79_RS20440 (C1N79_20450) - 4548081..4549898 (+) 1818 WP_137961346.1 sigma-70 family RNA polymerase sigma factor -
  C1N79_RS20445 (C1N79_20455) - 4549981..4550814 (-) 834 WP_137961347.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40069.84 Da        Isoelectric Point: 5.0058

>NTDB_id=231672 C1N79_RS20425 WP_029394644.1 4544887..4546011(-) (disA) [Streptomyces sp. SGAir0924]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTLLRDGLERVLRGNTGGLIVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=231672 C1N79_RS20425 WP_029394644.1 4544887..4546011(-) (disA) [Streptomyces sp. SGAir0924]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCGGTGGCGCCCGGCACGCTGCTGCGGGACGGCCTGGAGCGGGTCCTTCGCGGCAACACCGGCGGTCTGATCGTGC
TGGGCTCGGACAAGACCGTCGAGTCGATGTGCACCGGTGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCGTCGGACCTGTCGAAGATCCTGCGGGCGGGGGTGCAGCTGCTGCC
GGACCCGACCATTCCGACCGAGGAGACCGGTACGCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGGTTCCCCG
TCGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGCAGGGTGCTGGAGGACTCGGCCGCG
ATCCTGTCGCGGGCCAATCAGGCGCTGGCGACCCTGGAGCGCTACAAGCTGCGGCTGGACGAGGTCGCGGGCACCCTGTC
GGCGCTGGAGATCGAGGATCTGGTGACCGTCCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAGTTGGGCACGGACGGACGGCTGCTCGCGCTCCAGCTGGACGAGTTGATCGCC
GGGGTCGAGCCCGAGCGTGAGCTGGTCGTTCGGGACTACGTGCCCGAGCCGACCGCCAAGCGGTCCCGCACGGTCGACGA
GGCGCTGGCCGAGCTGGACAAGCTCAGCCACGCGGAGCTGCTCGAACTCTCGACCGTGGCGCGGGCGTTGGGGTACACCG
GGTCGCCCGAGACGCTGGACTCCGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGTGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTGTCGCGCCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447

Multiple sequence alignment