Detailed information NTG0231665

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: CCD84_RS00340
• Genome accession: NZ_CP021520
• Coordinates: 56543..59656 (-)
• Length: 1037 a.a.
• NCBI ID: WP_149449318.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain 11-7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	60450..61415	56543..59656	flank	794

Gene organization within MGE regions

Location: 56543..61415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCD84_RS00340 (CCD84_00365)	pilC	56543..59656 (-)	3114	WP_149449318.1	PilC family type IV pilus tip adhesin	Machinery gene
CCD84_RS00355 (CCD84_00380)	-	60450..61415 (+)	966	WP_002216744.1	IS30-like element IS1655 family transposase	-

Sequence

Protein

• Length: 1037 a.a.
• Molecular weight: 113051.42 Da
• Isoelectric Point: 9.7358

>NTDB_id=231665 CCD84_RS00340 WP_149449318.1 56543..59656(-) (pilC) [Neisseria meningitidis strain 11-7]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGRAQAETRNYAIVMNKQNQPEVKREGSYSTLREKDRKRKFDFNANNGGGGS
VSFNNSDELVSRQNGTAVFGTATYLPPYGKVSGFDDKRLKERGNAVNWIHTTHPGLIGYSYAGVVCRNSTGCPQLVYKTR
FSFDNTGLAKNAGMLDSHPDPSRENSPIYKLKDYPWLGVSFNLGSENTVKNSQSSNRLISSFSENNNNQTIVSTTESHPI
SLGDGQREHTAVVYYLNAKLHLLNKKQIQNITDKTVQLGVLKPSIDVKTQRTGFGGILSFWASWDIKDTGQIPVKLGLQQ
VKAGRCITTPNPNPKSKAPSPALTAPALWFGAGQDGKAEMYSASVSTYPDSSSSRIYLQNLKRKTDSNRPGRYSLADLSA
SDIQSKEPTFTSRQTIIRLDGGVRHIQLDRNNEVTSFNGDNGTFGIVNEGSVVPESNEWKKVLLPWTVRGFADDSKFKAF
NKEKNNDNKPKYSQRYRIRENGNNGKRDLGDIVNSPIVAVGEYLATSANDGMVHIFKKGNGGDARDYSLKLSYIPGTMPR
KDIQSQDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVNNLNGQDRVFMFGAMGFGGRGAYALDLTKADGNDPTKASLFD
VKDNGNNGNNGNNRVELGYTVGTPQIGKTHNGKYAAFLASGYATKEITSGENKTALYVYDLENNNGTPIAKIEVPNGKGG
LSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSSDNPSSWTVRTIFQGTKPITSAPAISQLKDKRVVIFGTGSDLSEEDV
DNNDIQSIYGIFDNDTDTGFAQDGLGKGLLEQKLSEENKTLFLTDYKRSDGSGSKGWVVKLKDGQRVTVKPTVVLRTAFV
TIHKYTGTDKCGAETAILGINTADGGKLTKKSARPIVPAANSKVAQYSGDKKTANGKSIPIGCMEKGNETVCPNGYVYDK
PVNVRYLDEKKIDGFSTTADGDAGGSGIDPAGKRSGKNNRCFSQKGVRTLLMNDLDSLDITGPTCGMKRISWREIFY

Nucleotide

• Length: 3114 bp

>NTDB_id=231665 CCD84_RS00340 WP_149449318.1 56543..59656(-) (pilC) [Neisseria meningitidis strain 11-7]
ATGAATAAAACTTTAAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCGCGCGCAGGCGGAAACCCGTAACTACGCTATTGTCATGAACAAACAAAATCAGCCGGAGGTAAAGCGGG
AGGGTTCATATTCAACCTTAAGGGAAAAAGACAGGAAACGCAAATTTGACTTTAATGCGAACAACGGGGGTGGAGGCTCT
GTCTCATTCAACAATAGCGATGAGCTTGTTTCTCGACAAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGTTTTGATGACAAAAGGCTGAAAGAGCGCGGCAATGCCGTTAATTGGATTCATACGACCCACC
CAGGGTTGATAGGCTACAGCTACGCCGGTGTCGTATGCAGAAACAGCACAGGCTGTCCCCAACTTGTCTATAAAACCCGA
TTTTCCTTCGACAACACCGGTTTGGCAAAAAATGCGGGCATGCTGGATAGTCACCCGGACCCAAGCCGCGAAAATTCGCC
CATTTACAAATTGAAAGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATAGCCAAT
CATCCAACAGATTGATATCTTCTTTTAGTGAAAACAATAATAATCAAACCATCGTCTCTACGACAGAAAGCCACCCTATT
TCCCTTGGCGACGGGCAGCGCGAACATACCGCCGTGGTCTATTATCTGAACGCCAAGCTGCACCTGCTGAATAAAAAACA
GATTCAAAATATCACCGACAAAACAGTGCAGTTGGGTGTCTTGAAGCCGAGCATCGATGTGAAGACACAAAGGACGGGGT
TTGGCGGCATTCTATCTTTTTGGGCTAGTTGGGACATTAAAGATACCGGGCAGATTCCAGTCAAGCTCGGCCTGCAGCAA
GTCAAAGCAGGCCGCTGCATCACCACACCGAACCCCAATCCCAAATCCAAAGCCCCTTCGCCGGCACTGACCGCCCCCGC
GCTGTGGTTCGGAGCTGGGCAAGATGGTAAGGCGGAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGAGCA
GCCGCATCTACCTTCAAAATCTGAAAAGAAAAACCGACTCCAACAGACCCGGCCGCTATTCCCTCGCAGACTTGAGTGCG
TCGGATATTCAAAGTAAAGAGCCGACTTTCACAAGTCGGCAAACAATCATCCGCTTGGATGGTGGCGTACGGCATATCCA
ACTGGATAGAAACAATGAGGTCACTAGTTTTAATGGCGACAACGGAACTTTCGGCATTGTTAATGAAGGGAGCGTCGTTC
CTGAAAGCAACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTTTTGCTGATGACAGTAAATTTAAAGCATTC
AACAAAGAAAAAAACAACGACAACAAGCCAAAATACAGCCAAAGATACCGCATCCGCGAAAACGGCAACAACGGCAAGCG
CGATTTGGGCGACATCGTCAACAGCCCCATCGTGGCGGTCGGCGAGTATTTGGCTACTTCCGCCAACGACGGGATGGTGC
ATATCTTCAAAAAAGGCAACGGCGGGGACGCGCGCGACTATAGTCTGAAGCTCAGCTACATCCCGGGCACGATGCCGCGC
AAGGATATTCAAAGTCAAGACTCCACCCTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTA
CGGCGTGGACGGCGGCTTTGTCTTGCGCCAAGTTAACAACTTAAATGGGCAAGACCGCGTGTTTATGTTCGGCGCGATGG
GCTTTGGCGGCAGAGGTGCGTATGCCTTGGATTTGACCAAAGCCGACGGCAATGACCCGACAAAAGCCTCTTTGTTTGAT
GTAAAAGATAACGGCAATAATGGCAATAACGGCAATAATCGCGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGG
CAAAACCCACAACGGCAAATACGCCGCTTTCCTCGCCTCCGGTTATGCGACTAAAGAAATTACCAGCGGCGAGAATAAAA
CCGCGCTGTATGTGTATGATTTGGAAAACAACAACGGTACGCCGATTGCAAAAATCGAAGTACCCAACGGCAAGGGCGGG
CTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGATCGCGGCGGGAATAT
GTACCGCTTTGATTTGAGCAGCGACAATCCGTCCAGCTGGACTGTACGCACTATTTTCCAAGGCACGAAGCCGATTACTT
CCGCGCCCGCCATTTCCCAACTGAAAGACAAACGCGTGGTTATCTTCGGCACGGGCAGTGATTTGAGTGAGGAAGATGTT
GATAATAATGATATACAATCTATTTACGGTATTTTTGACAATGACACAGACACGGGTTTTGCGCAAGACGGGCTGGGCAA
AGGGCTGCTCGAGCAAAAGCTTAGTGAGGAAAATAAAACCTTATTCCTGACCGATTACAAGCGATCCGACGGATCGGGCA
GCAAAGGGTGGGTAGTGAAATTGAAGGACGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTA
ACCATCCATAAATATACGGGTACGGACAAATGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCAA
GCTGACCAAGAAAAGCGCGCGCCCGATTGTGCCGGCAGCCAATTCGAAGGTCGCGCAATATTCCGGCGATAAGAAAACCG
CCAACGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCAATGAAACCGTCTGCCCGAACGGATATGTTTACGACAAA
CCGGTTAATGTGCGTTATCTGGATGAAAAGAAAATAGACGGATTTTCAACAACGGCAGACGGCGATGCGGGCGGCAGCGG
TATAGACCCCGCCGGCAAGCGTTCCGGCAAAAACAACCGCTGCTTCTCCCAAAAAGGGGTGCGCACCCTGCTGATGAACG
ATTTGGACAGCTTGGACATTACCGGCCCGACGTGCGGTATGAAACGAATCAGCTGGCGTGAAATCTTCTACTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (509-844)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	78.952	100	0.799