Detailed information NTG0231508

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: S101441_RS20280
• Genome accession: NZ_CP021507
• Coordinates: 3806396..3807541 (+)
• Length: 381 a.a.
• NCBI ID: WP_069837832.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3801396..3812541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101441_RS20255 (S101441_04089)	albF	3801416..3802696 (+)	1281	WP_069837829.1	pitrilysin family protein	-
S101441_RS20260 (S101441_04090)	albG	3802693..3803394 (+)	702	WP_069837830.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
S101441_RS20265 (S101441_04091)	ywhL	3803400..3804776 (-)	1377	WP_069837831.1	YncE family protein	-
S101441_RS20270	ywhK	3804815..3806166 (-)	1352	Protein_3946	YncE family protein	-
S101441_RS23395	-	3806163..3806393 (-)	231	Protein_3947	hypothetical protein	-
S101441_RS20280 (S101441_04094)	rapF	3806396..3807541 (+)	1146	WP_069837832.1	response regulator aspartate phosphatase RapF	Regulator
S101441_RS20285 (S101441_04095)	phrF	3807525..3807644 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
S101441_RS20290 (S101441_04096)	-	3807742..3808169 (+)	428	Protein_3950	YbaK/EbsC family protein	-
S101441_RS20295 (S101441_04097)	speB	3808234..3809106 (-)	873	WP_003227545.1	agmatinase	-
S101441_RS20300 (S101441_04098)	speE	3809167..3809997 (-)	831	WP_003227543.1	spermidine synthase	-
S101441_RS20305 (S101441_04099)	pbpG	3810199..3812274 (+)	2076	WP_069837833.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45624.07 Da
• Isoelectric Point: 5.0624

>NTDB_id=231508 S101441_RS20280 WP_069837832.1 3806396..3807541(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFTIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=231508 S101441_RS20280 WP_069837832.1 3806396..3807541(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM101441]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCACTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57