Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   S101359_RS07615 Genome accession   NZ_CP021500
Coordinates   1520542..1521117 (+) Length   191 a.a.
NCBI ID   WP_003327252.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SRCM101359     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1515542..1526117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101359_RS07585 (S101359_01495) dapD 1515672..1516382 (+) 711 WP_003327258.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  S101359_RS07590 (S101359_01496) - 1516455..1517579 (+) 1125 WP_061670698.1 N-acetyldiaminopimelate deacetylase -
  S101359_RS07595 (S101359_01497) - 1517640..1517885 (+) 246 WP_003327256.1 YkuS family protein -
  S101359_RS07600 (S101359_01498) - 1517924..1518727 (-) 804 WP_003327255.1 mechanosensitive ion channel family protein -
  S101359_RS07605 (S101359_01499) ahpA 1518977..1519519 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  S101359_RS07610 (S101359_01500) - 1519604..1520062 (+) 459 WP_088117080.1 TlpA disulfide reductase family protein -
  S101359_RS07615 (S101359_01501) rok 1520542..1521117 (+) 576 WP_003327252.1 transcriptional regulator Rok Regulator
  S101359_RS07620 (S101359_01502) - 1521163..1522122 (-) 960 WP_010788466.1 hypothetical protein -
  S101359_RS07625 (S101359_01503) - 1522266..1522850 (+) 585 WP_010788467.1 molybdenum cofactor guanylyltransferase -
  S101359_RS07630 (S101359_01504) - 1522922..1523941 (+) 1020 WP_088117081.1 MoeB/ThiF family adenylyltransferase -
  S101359_RS07635 (S101359_01505) glp 1523960..1525252 (+) 1293 WP_088117082.1 gephyrin-like molybdotransferase Glp -
  S101359_RS07640 (S101359_01506) mobB 1525213..1525737 (+) 525 WP_088117083.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21713.65 Da        Isoelectric Point: 9.8783

>NTDB_id=231285 S101359_RS07615 WP_003327252.1 1520542..1521117(+) (rok) [Bacillus atrophaeus strain SRCM101359]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSISSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=231285 S101359_RS07615 WP_003327252.1 1520542..1521117(+) (rok) [Bacillus atrophaeus strain SRCM101359]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTAGCCGAGCTTGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCATCTCTTCTATTCCGGCGGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACTGCAAGACCGGGTTCAAAGGCAGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCCGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCTGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.598

100

0.88

Multiple sequence alignment