Detailed information NTG0023075

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CV_RS20840
• Genome accession: NC_005085
• Coordinates: 4534974..4536101 (+)
• Length: 375 a.a.
• NCBI ID: WP_011137749.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum ATCC 12472
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4529974..4541101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV_RS20790 (CV4197)	rplK	4530567..4530998 (-)	432	WP_011137744.1	50S ribosomal protein L11	-
CV_RS20795 (CV4198)	nusG	4531099..4531632 (-)	534	WP_011137745.1	transcription termination/antitermination protein NusG	-
CV_RS20800 (CV4199)	secE	4531632..4531988 (-)	357	WP_011137746.1	preprotein translocase subunit SecE	-
CV_RS20810 (CV4200)	tuf	4532139..4533329 (-)	1191	WP_011137735.1	elongation factor Tu	-
CV_RS20830 (CV4201)	-	4533819..4534070 (-)	252	WP_011137747.1	YfhL family 4Fe-4S dicluster ferredoxin	-
CV_RS20835 (CV4202)	rsmD	4534180..4534734 (-)	555	WP_011137748.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CV_RS20840 (CV4203)	pilA	4534974..4536101 (+)	1128	WP_011137749.1	signal recognition particle-docking protein FtsY	Machinery gene
CV_RS20845 (CV4204)	ftsE	4536162..4536815 (+)	654	WP_011137750.1	cell division ATP-binding protein FtsE	-
CV_RS20850 (CV4205)	ftsX	4536812..4537720 (+)	909	WP_011137751.1	permease-like cell division protein FtsX	-
CV_RS20855 (CV4206)	rpoH	4537849..4538712 (+)	864	WP_011137752.1	RNA polymerase sigma factor RpoH	-
CV_RS20860 (CV4207)	-	4538803..4540587 (-)	1785	WP_011137753.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 40053.20 Da
• Isoelectric Point: 5.0722

>NTDB_id=23075 CV_RS20840 WP_011137749.1 4534974..4536101(+) (pilA) [Chromobacterium violaceum ATCC 12472]
MFSFFKKKTKPAETPQIETPALLAPEQAPAAPETIAPVPEPQREPVAAPIAETAPASAEAAVAAIPDEPVPLKKMSWTER
LKAGLAKTRDKLGKQLAGLFGGGKIDEDLYEELETVLLTADMGMDATEHLLQDVRERVSLKGLKDSSELKGALKDSLQDL
IGPLEVPLNVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLIAWGERNNVTVIAQQGGD
SAAVCYDAIQAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDANIGQNTVNQVKAFDDALG
LTGLILTKLDGTAKGGVIAAIAKQRPIPLRFVGVGESIDDLRPFDSRDYIDALFE

Nucleotide

• Length: 1128 bp

>NTDB_id=23075 CV_RS20840 WP_011137749.1 4534974..4536101(+) (pilA) [Chromobacterium violaceum ATCC 12472]
ATGTTTAGCTTCTTCAAGAAAAAGACCAAGCCGGCCGAAACGCCGCAGATCGAAACGCCGGCGCTGCTCGCGCCGGAACA
GGCGCCCGCCGCGCCGGAGACCATCGCCCCCGTCCCGGAGCCGCAGCGCGAGCCCGTCGCCGCCCCCATCGCGGAAACAG
CCCCCGCCTCTGCTGAGGCCGCCGTTGCGGCCATCCCTGACGAGCCCGTGCCCCTGAAGAAAATGAGCTGGACCGAGCGG
CTGAAGGCAGGCCTGGCCAAAACCCGCGACAAGCTGGGCAAGCAGCTGGCCGGCCTGTTCGGCGGCGGCAAGATCGACGA
AGACCTGTACGAGGAACTGGAGACGGTGCTGCTGACCGCCGACATGGGCATGGACGCCACCGAGCACCTGCTGCAGGACG
TGCGCGAGCGGGTATCGCTGAAGGGGCTGAAAGATTCGTCCGAATTGAAGGGCGCGCTGAAGGATTCGCTGCAGGATCTG
ATCGGCCCGCTGGAAGTGCCGCTGAACGTGGAAGGCAAGAAGCCGTTCGTGATCATGATGACCGGCGTCAACGGCGCCGG
CAAGACCACCTCCATCGGCAAGCTGGCCAAGTATTATCAGAGCCAGGGCAAAAGCGTGCTGCTGGCCGCCGGCGACACCT
TCCGCGCCGCCGCGCGCGAGCAGCTGATCGCCTGGGGCGAGCGCAACAACGTCACCGTGATCGCGCAGCAAGGCGGCGAC
TCCGCCGCCGTCTGCTATGACGCGATCCAGGCCGCCATCGCCCGCGGCATCGACATCGTGCTGGCCGACACCGCCGGCCG
CCTGCCGACGCAGCTGCACCTGATGGAAGAGATCAAGAAGGTGAAGCGCGTGATCCAGAAGGCGCTGCCGGACGCGCCGC
ACGAGGTGGTGCTGGTGCTGGACGCCAATATCGGCCAGAACACCGTCAATCAGGTGAAGGCCTTCGACGACGCGCTGGGC
CTGACCGGCCTGATCCTGACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGATCGCCGCCATCGCCAAGCAGCGGCCGAT
TCCGCTGCGCTTCGTCGGCGTCGGCGAGAGCATCGACGACCTGCGGCCGTTCGACAGCCGCGACTACATCGACGCGCTGT
TCGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (175-374)

• SRP54-type protein, helical bundle domain (SRP54_N) (92-157)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.397	100	0.707