Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CCK83_RS15000 | Genome accession | NZ_CP021428 |
| Coordinates | 3102224..3102604 (+) | Length | 126 a.a. |
| NCBI ID | WP_005069533.1 | Uniprot ID | A0A022IXP4 |
| Organism | Acinetobacter pittii strain HUMV-6483 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3097224..3107604
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCK83_RS14970 | kdsB | 3098130..3098891 (+) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| CCK83_RS14975 | holB | 3098905..3099885 (+) | 981 | WP_032007245.1 | DNA polymerase III subunit delta' | - |
| CCK83_RS14980 | pilZ | 3099896..3100237 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| CCK83_RS14985 | ycfH | 3100255..3101028 (+) | 774 | WP_005069538.1 | TatD family hydrolase | - |
| CCK83_RS14990 | - | 3101065..3101673 (+) | 609 | WP_005069536.1 | TetR/AcrR family transcriptional regulator | - |
| CCK83_RS14995 | - | 3101680..3102234 (+) | 555 | WP_005069534.1 | type II secretion system protein | - |
| CCK83_RS15000 | xcpV | 3102224..3102604 (+) | 381 | WP_005069533.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CCK83_RS15005 | xcpW | 3102604..3103419 (+) | 816 | WP_087400584.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CCK83_RS15010 | gspK | 3103420..3104379 (+) | 960 | WP_032052182.1 | type II secretion system minor pseudopilin GspK | - |
| CCK83_RS15015 | - | 3104609..3105205 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CCK83_RS15020 | ung | 3105259..3105972 (+) | 714 | WP_005069527.1 | uracil-DNA glycosylase | - |
| CCK83_RS15025 | hibch | 3105969..3107093 (+) | 1125 | WP_014206599.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CCK83_RS15030 | tadA | 3107099..3107602 (+) | 504 | WP_032052181.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13934.09 Da Isoelectric Point: 9.4463
>NTDB_id=230691 CCK83_RS15000 WP_005069533.1 3102224..3102604(+) (xcpV) [Acinetobacter pittii strain HUMV-6483]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=230691 CCK83_RS15000 WP_005069533.1 3102224..3102604(+) (xcpV) [Acinetobacter pittii strain HUMV-6483]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTGCGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
94.444 |
100 |
0.944 |