Detailed information NTG0230692

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CCK83_RS15005
• Genome accession: NZ_CP021428
• Coordinates: 3102604..3103419 (+)
• Length: 271 a.a.
• NCBI ID: WP_087400584.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUMV-6483
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3097604..3108419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCK83_RS14970	kdsB	3098130..3098891 (+)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CCK83_RS14975	holB	3098905..3099885 (+)	981	WP_032007245.1	DNA polymerase III subunit delta'	-
CCK83_RS14980	pilZ	3099896..3100237 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
CCK83_RS14985	ycfH	3100255..3101028 (+)	774	WP_005069538.1	TatD family hydrolase	-
CCK83_RS14990	-	3101065..3101673 (+)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
CCK83_RS14995	-	3101680..3102234 (+)	555	WP_005069534.1	type II secretion system protein	-
CCK83_RS15000	xcpV	3102224..3102604 (+)	381	WP_005069533.1	type II secretion system minor pseudopilin GspI	Machinery gene
CCK83_RS15005	xcpW	3102604..3103419 (+)	816	WP_087400584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CCK83_RS15010	gspK	3103420..3104379 (+)	960	WP_032052182.1	type II secretion system minor pseudopilin GspK	-
CCK83_RS15015	-	3104609..3105205 (+)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
CCK83_RS15020	ung	3105259..3105972 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
CCK83_RS15025	hibch	3105969..3107093 (+)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
CCK83_RS15030	tadA	3107099..3107602 (+)	504	WP_032052181.1	tRNA adenosine(34) deaminase TadA	-
CCK83_RS15035	-	3107673..3108113 (+)	441	WP_087400587.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30777.23 Da
• Isoelectric Point: 10.1956

>NTDB_id=230692 CCK83_RS15005 WP_087400584.1 3102604..3103419(+) (xcpW) [Acinetobacter pittii strain HUMV-6483]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQSSSSSAQTKLRFKGSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGSSPFERIEYRYDPVQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTIAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=230692 CCK83_RS15005 WP_087400584.1 3102604..3103419(+) (xcpW) [Acinetobacter pittii strain HUMV-6483]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCTGAGCAAAGCTCTTCGTCTTCCGCTCAGACAAAGCTTCGCTTTAAAGGCTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGGTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATCATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGTTCAAAAAAAGCTTTATCGCCTAAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGCTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGATTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAATCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	85.281	85.24	0.727