Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CSB97_RS26835 | Genome accession | NZ_CP027165 |
| Coordinates | 5679758..5680123 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain AR_0360 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 5674758..5685123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB97_RS26805 (CSB97_5399) | pyrR | 5675380..5675892 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| CSB97_RS26810 (CSB97_5400) | ruvX | 5676004..5676438 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CSB97_RS26815 (CSB97_5401) | - | 5676438..5677007 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| CSB97_RS26820 (CSB97_5402) | - | 5677056..5677949 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| CSB97_RS26825 (CSB97_5403) | gshB | 5678096..5679049 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| CSB97_RS26830 (CSB97_5404) | pilG | 5679304..5679711 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CSB97_RS26835 (CSB97_5405) | pilH | 5679758..5680123 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CSB97_RS26840 (CSB97_5406) | - | 5680174..5680710 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CSB97_RS26845 (CSB97_5407) | pilJ | 5680795..5682843 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CSB97_RS26850 (CSB97_5408) | pilK | 5682904..5683779 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=230650 CSB97_RS26835 WP_003084587.1 5679758..5680123(+) (pilH) [Pseudomonas aeruginosa strain AR_0360]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=230650 CSB97_RS26835 WP_003084587.1 5679758..5680123(+) (pilH) [Pseudomonas aeruginosa strain AR_0360]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |