Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   CCE29_RS14145 Genome accession   NZ_CP021426
Coordinates   2735886..2737127 (+) Length   413 a.a.
NCBI ID   WP_005684320.1    Uniprot ID   -
Organism   Lacticaseibacillus rhamnosus strain 4B15     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2730886..2742127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCE29_RS14110 (CCE29_14025) pyrH 2731171..2731890 (+) 720 WP_005684324.1 UMP kinase -
  CCE29_RS14115 (CCE29_14030) frr 2731890..2732447 (+) 558 WP_005684323.1 ribosome recycling factor -
  CCE29_RS14120 (CCE29_14035) - 2732524..2733417 (-) 894 WP_127817607.1 IS3 family transposase -
  CCE29_RS14125 (CCE29_14040) - 2733369..2733905 (-) 537 WP_014569708.1 helix-turn-helix domain-containing protein -
  CCE29_RS14135 (CCE29_14050) - 2734293..2735045 (+) 753 WP_005684322.1 isoprenyl transferase -
  CCE29_RS14140 (CCE29_14055) - 2735081..2735869 (+) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  CCE29_RS14145 (CCE29_14060) eeP 2735886..2737127 (+) 1242 WP_005684320.1 RIP metalloprotease RseP Regulator
  CCE29_RS14150 (CCE29_14065) - 2737151..2738881 (+) 1731 WP_005684319.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 413 a.a.        Molecular weight: 45253.82 Da        Isoelectric Point: 7.4658

>NTDB_id=230629 CCE29_RS14145 WP_005684320.1 2735886..2737127(+) (eeP) [Lacticaseibacillus rhamnosus strain 4B15]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGTVTRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEALIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=230629 CCE29_RS14145 WP_005684320.1 2735886..2737127(+) (eeP) [Lacticaseibacillus rhamnosus strain 4B15]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGCAGCGGAATATTAGTACGTGAGTTTTCGATTGGCATGGGGCCTAAGCTATGGGCCTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGTATGGCTGGCTGGCAGGATGAGGAAGATGAAATCAAGCCTGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTACAGTGACGCGGATTAATGCCAGTGATAAAACAACGCTGGCAGGTGG
CATGCCGGTACAAGTAAGCCGCGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAAGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAATGCCCCGGTTTGGCGGCGTCTAATTGTTAACTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGGTTGATGTTTGGCGTGCAGGTCTTAAATACCAATCAAATCGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCCGGGCTTAAGTCAAATGCCACAATTCAGGCGATTGATGGTGAAAAGATTCATTCTTTTACTGATCTT
TCCAGCAAAGTCAGCAAACAGGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTCAT
CAAGCCTAACAAGGATGGCAAGATCGGTGTGGAAGCACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTGACTGGCGGCTTTTCGCTTAATAAGTTA
GCTGGGCCGGTCGGAATTTATACCATGACCAGTCAAAGTGCTAAAGGTGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGTCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTCTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCGTTGAAGCCTGAAACAGAAGGTGTTGTCACCATGGTTGGCCTCGGGTTGATGGTACTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains


Predicted by InterproScan.

(206-257)

(6-400)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.821

100

0.501

  eeP Streptococcus thermophilus LMD-9

48.585

100

0.499


Multiple sequence alignment