Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GBS_RS04330 | Genome accession | NC_004368 |
| Coordinates | 807181..807777 (+) | Length | 198 a.a. |
| NCBI ID | WP_000966735.1 | Uniprot ID | Q3K1U0 |
| Organism | Streptococcus agalactiae NEM316 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 802181..812777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBS_RS04315 (gbs0783) | tpiA | 803365..804123 (+) | 759 | WP_000087883.1 | triose-phosphate isomerase | - |
| GBS_RS04320 (gbs0784) | - | 804300..804992 (+) | 693 | WP_000240135.1 | phosphoglycerate mutase | - |
| GBS_RS04325 (gbs0785) | pbp2b | 805121..807166 (+) | 2046 | WP_000934666.1 | penicillin-binding protein PBP2B | - |
| GBS_RS04330 (gbs0786) | recR | 807181..807777 (+) | 597 | WP_000966735.1 | recombination mediator RecR | Machinery gene |
| GBS_RS04335 (gbs0787) | - | 807918..808964 (+) | 1047 | WP_000032513.1 | D-alanine--D-alanine ligase | - |
| GBS_RS04340 (gbs0788) | murF | 809111..810478 (+) | 1368 | WP_000777517.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| GBS_RS04345 (gbs0789) | - | 810665..811885 (+) | 1221 | WP_000793481.1 | OFA family MFS transporter | - |
| GBS_RS04350 (gbs0790) | - | 812014..812700 (+) | 687 | WP_000569006.1 | YwaF family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21619.82 Da Isoelectric Point: 4.5632
>NTDB_id=23057 GBS_RS04330 WP_000966735.1 807181..807777(+) (recR) [Streptococcus agalactiae NEM316]
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=23057 GBS_RS04330 WP_000966735.1 807181..807777(+) (recR) [Streptococcus agalactiae NEM316]
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
88.384 |
100 |
0.884 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
66.667 |
100 |
0.667 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |