Detailed information NTG0230321

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CBR65_RS09330
• Genome accession: NZ_CP021382
• Coordinates: 2245794..2247176 (+)
• Length: 460 a.a.
• NCBI ID: WP_087466596.1
• Uniprot ID: A0A1Y0FVU6
• Organism: Cellvibrio sp. PSBB006
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2240794..2252176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CBR65_RS09315 (CBR65_09300)	-	2241358..2242263 (+)	906	WP_087466594.1	outer membrane protein assembly factor BamD	-
CBR65_RS09320 (CBR65_09305)	-	2242328..2243956 (-)	1629	WP_087468997.1	NAD+ synthase	-
CBR65_RS09325 (CBR65_09310)	-	2244145..2245752 (+)	1608	WP_087466595.1	PAS domain-containing sensor histidine kinase	-
CBR65_RS09330 (CBR65_09315)	pilR	2245794..2247176 (+)	1383	WP_087466596.1	sigma-54 dependent transcriptional regulator	Regulator
CBR65_RS09335 (CBR65_09320)	-	2247178..2247591 (-)	414	WP_087466597.1	type IV pilin protein	-
CBR65_RS09340 (CBR65_09325)	-	2247610..2251995 (-)	4386	WP_087466598.1	pilus assembly protein	-

Sequence

Protein

• Length: 460 a.a.
• Molecular weight: 51378.64 Da
• Isoelectric Point: 6.2374

>NTDB_id=230321 CBR65_RS09330 WP_087466596.1 2245794..2247176(+) (pilR) [Cellvibrio sp. PSBB006]
MSNKRALVIDDEPDIRELLEITLGRMQIDTDSVASVKEARHHLAQQHYDLCLTDMRLPDGNGLELVEFIQQHHPRLPVAV
ITAHGSVDTAIESMKAGAFDFITKPVNLSTLRKLVSTAIQSSQLPPAKMPNDTLIIGQSSAIQDLTRSIQKLARSQAPVY
ISGESGSGKELVARSIHELGPRAHKPFIAVNCGAIPRELMESEFFGHKKGSFTGAHQDKPGLFQAAEGGTLFFDEVADLP
LDMQVKLLRAIQEKSVRAVGSAEEIATDVRILCATHKSLEREVQDGRFRQDLFYRLNVIQLSVPALRERRQDIPLLANHL
LQKLAEAVNLPTPRLSNDALKRLNDYAFPGNVRELENILERAFTLSDSDVIEAEDLQLHGEQSLKIHPLSHKPSSSNLVD
YPARCAEYPSLDDYLQDVEKDILCNMLEQVKWNKTLAAKQLGISFRSLRYRLQKLGLDED

Nucleotide

• Length: 1383 bp

>NTDB_id=230321 CBR65_RS09330 WP_087466596.1 2245794..2247176(+) (pilR) [Cellvibrio sp. PSBB006]
ATGAGCAACAAACGCGCACTGGTTATTGACGATGAACCGGACATTCGCGAACTGCTGGAAATCACCTTGGGCCGAATGCA
AATCGACACCGATAGTGTCGCCAGCGTTAAAGAGGCTCGGCACCATCTCGCTCAGCAACACTATGATCTTTGTTTGACCG
ATATGCGCCTGCCCGATGGCAACGGATTAGAACTGGTGGAATTTATTCAGCAACACCACCCTCGCTTACCGGTTGCGGTC
ATTACCGCCCATGGCAGTGTGGATACCGCTATTGAGTCGATGAAGGCCGGTGCCTTTGATTTTATAACCAAGCCGGTAAA
CCTCAGCACACTTCGCAAACTCGTTTCCACCGCGATTCAATCCAGTCAATTACCGCCAGCAAAGATGCCCAACGATACTT
TAATTATCGGGCAATCTTCTGCTATTCAGGACCTTACTCGCAGCATCCAAAAGCTTGCCAGGTCCCAGGCGCCAGTATAT
ATCAGCGGTGAATCCGGCTCGGGCAAAGAATTAGTGGCACGCTCAATCCATGAACTTGGCCCTCGCGCGCACAAACCCTT
TATTGCAGTCAACTGTGGTGCGATTCCTCGCGAATTGATGGAGAGTGAGTTTTTTGGTCACAAGAAAGGCAGTTTTACCG
GCGCACATCAGGATAAACCCGGCCTGTTTCAAGCAGCCGAAGGCGGTACATTATTCTTCGATGAAGTTGCCGATCTGCCA
CTCGACATGCAAGTAAAACTTCTGCGCGCTATCCAGGAAAAGTCCGTGCGCGCTGTCGGTTCCGCCGAAGAAATTGCAAC
CGATGTACGCATACTCTGCGCTACACACAAGAGCCTTGAAAGGGAAGTCCAGGATGGCCGCTTTCGCCAGGACTTATTCT
ATCGCCTAAATGTGATTCAACTGTCTGTCCCCGCACTTCGTGAACGCCGGCAGGATATTCCTTTACTAGCTAACCACCTG
CTGCAAAAGCTGGCTGAGGCCGTCAATTTGCCAACGCCCCGTTTATCCAACGACGCGTTAAAACGGCTGAATGATTATGC
ATTCCCCGGCAATGTACGCGAATTGGAAAATATTCTGGAACGTGCATTCACGTTAAGCGACAGCGATGTTATTGAGGCGG
AAGACTTGCAGCTGCATGGCGAGCAATCACTCAAGATACATCCCTTATCCCATAAGCCCTCAAGCAGCAATCTCGTCGAC
TACCCGGCCCGCTGCGCTGAGTACCCATCATTGGATGATTATTTACAGGATGTAGAGAAAGATATTTTGTGTAACATGCT
GGAACAGGTGAAATGGAATAAAACCCTAGCTGCGAAGCAGCTAGGGATTAGTTTTCGGTCGTTGCGGTATCGGTTGCAGA
AGTTGGGGTTGGATGAGGATTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (415-455)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (7-115)

3D structure

• AlphaFold DB: A0A1Y0FVU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.445	99.565	0.622
pilR	Acinetobacter baumannii strain A118	50.217	100	0.502