Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AB987_RS09165 | Genome accession | NZ_CP021347 |
| Coordinates | 1883440..1883913 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214064.1 | Uniprot ID | A0A0J8UYN3 |
| Organism | Acinetobacter baumannii strain B8300 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1878440..1888913
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB987_RS09145 (AB987_1849) | - | 1878903..1881008 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| AB987_RS18855 | - | 1881048..1881178 (-) | 131 | Protein_1759 | hypothetical protein | - |
| AB987_RS09150 (AB987_1850) | rpoZ | 1881217..1881495 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AB987_RS09155 (AB987_1851) | gmk | 1881568..1882197 (-) | 630 | WP_000015939.1 | guanylate kinase | - |
| AB987_RS09160 (AB987_1852) | ispH | 1882320..1883270 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AB987_RS09165 (AB987_1853) | fimU | 1883440..1883913 (+) | 474 | WP_001214064.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| AB987_RS09170 (AB987_1854) | pilV | 1883907..1884467 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| AB987_RS09175 (AB987_1855) | pilW | 1884468..1885469 (+) | 1002 | WP_000079193.1 | PilW family protein | Machinery gene |
| AB987_RS09180 (AB987_1856) | pilX | 1885466..1886284 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16850.43 Da Isoelectric Point: 8.5355
>NTDB_id=230105 AB987_RS09165 WP_001214064.1 1883440..1883913(+) (fimU) [Acinetobacter baumannii strain B8300]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=230105 AB987_RS09165 WP_001214064.1 1883440..1883913(+) (fimU) [Acinetobacter baumannii strain B8300]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |