Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | CA931_RS03325 | Genome accession | NZ_CP021262 |
| Coordinates | 691975..692679 (-) | Length | 234 a.a. |
| NCBI ID | WP_027223686.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain U8W (D-7160) | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 686975..697679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA931_RS03310 | - | 689850..690362 (-) | 513 | WP_027223683.1 | pilus assembly protein | - |
| CA931_RS03315 | - | 690359..691426 (-) | 1068 | WP_027223684.1 | PilW family protein | - |
| CA931_RS03320 | pilV | 691423..691962 (-) | 540 | WP_027223685.1 | type IV pilus modification protein PilV | - |
| CA931_RS03325 | fimT | 691975..692679 (-) | 705 | WP_027223686.1 | GspH/FimT family pseudopilin | Machinery gene |
| CA931_RS03330 | - | 692894..693757 (-) | 864 | WP_027223687.1 | polysaccharide deacetylase family protein | - |
| CA931_RS03335 | - | 693933..695282 (-) | 1350 | WP_080273326.1 | lpg0634 family Dot/Icm T4SS effector | - |
| CA931_RS03340 | - | 695557..697038 (+) | 1482 | WP_027223689.1 | glycosyltransferase family 39 protein | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 24957.58 Da Isoelectric Point: 7.9577
>NTDB_id=229203 CA931_RS03325 WP_027223686.1 691975..692679(-) (fimT) [Legionella pneumophila subsp. pascullei strain U8W (D-7160)]
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP
Nucleotide
Download Length: 705 bp
>NTDB_id=229203 CA931_RS03325 WP_027223686.1 691975..692679(-) (fimT) [Legionella pneumophila subsp. pascullei strain U8W (D-7160)]
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
89.787 |
100 |
0.902 |