Detailed information NTG0228960

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: C5F73_RS23325
• Genome accession: NZ_CP026932
• Coordinates: 4889465..4890490 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CFS3273
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4884465..4895490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5F73_RS23305 (C5F73_25180)	metJ	4885526..4885843 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
C5F73_RS23310 (C5F73_25185)	yiiX	4886027..4886635 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
C5F73_RS23315 (C5F73_25190)	rpmE	4886696..4886908 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
C5F73_RS23320 (C5F73_25195)	priA	4887111..4889309 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
C5F73_RS23325 (C5F73_25200)	cytR	4889465..4890490 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
C5F73_RS23330 (C5F73_25205)	ftsN	4890582..4891541 (+)	960	WP_000068828.1	cell division protein FtsN	-
C5F73_RS23335 (C5F73_25210)	hslV	4891634..4892164 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
C5F73_RS23340 (C5F73_25215)	hslU	4892174..4893505 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
C5F73_RS23345 (C5F73_25220)	menA	4893572..4894498 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
C5F73_RS23350 (C5F73_25225)	rraA	4894591..4895076 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
C5F73_RS23355 (C5F73_25230)	zapB	4895161..4895406 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=228960 C5F73_RS23325 WP_000644904.1 4889465..4890490(+) (cytR) [Escherichia coli strain CFS3273]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=228960 C5F73_RS23325 WP_000644904.1 4889465..4890490(+) (cytR) [Escherichia coli strain CFS3273]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628