Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   B9N48_RS05970 Genome accession   NZ_CP021169
Coordinates   1141397..1141588 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain TLO3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136397..1146588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS05940 argF 1137259..1138218 (+) 960 WP_086343700.1 ornithine carbamoyltransferase -
  B9N48_RS05945 yjzC 1138304..1138483 (+) 180 WP_003245356.1 YjzC family protein -
  B9N48_RS05950 yjzD 1138530..1138715 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  B9N48_RS05955 - 1138966..1139700 (+) 735 WP_033883595.1 hypothetical protein -
  B9N48_RS05960 - 1139782..1140339 (+) 558 WP_038428783.1 hypothetical protein -
  B9N48_RS05965 med 1140429..1141382 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  B9N48_RS05970 comZ 1141397..1141588 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  B9N48_RS05975 yjzB 1141618..1141854 (-) 237 WP_072173825.1 spore coat protein YjzB -
  B9N48_RS05980 fabH 1142019..1142957 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  B9N48_RS05985 fabF 1142980..1144221 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  B9N48_RS05990 yjaZ 1144297..1145082 (+) 786 WP_086343701.1 DUF2268 domain-containing protein -
  B9N48_RS05995 appD 1145274..1146260 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=228752 B9N48_RS05970 WP_003224559.1 1141397..1141588(+) (comZ) [Bacillus subtilis strain TLO3]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=228752 B9N48_RS05970 WP_003224559.1 1141397..1141588(+) (comZ) [Bacillus subtilis strain TLO3]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment